dbCAN Logo

Cluster: HRGMv2_0177_CGC69

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0177_71 HRGMv2_0177_71_10 9153 12617 + 1.B.14.6.1
pfam HRGMv2_0177_71 HRGMv2_0177_71_11 12630 14615 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0177_71 HRGMv2_0177_71_12 14633 15751 + GH105
CAZyme HRGMv2_0177_71 HRGMv2_0177_71_13 16100 17716 + GH76
CAZyme HRGMv2_0177_71 HRGMv2_0177_71_14 17760 18791 + PL32
CAZyme HRGMv2_0177_71 HRGMv2_0177_71_15 18881 20686 + PL32
CAZyme HRGMv2_0177_71 HRGMv2_0177_71_16 20739 22793 + GH154
CAZyme HRGMv2_0177_71 HRGMv2_0177_71_17 22827 24857 + CBM32 | GH105
NULL(UNKNOWN) HRGMv2_0177_71 HRGMv2_0177_71_18 24971 25378 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0177_71 HRGMv2_0177_71_19 25697 25987 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0177_71 HRGMv2_0177_71_20 26120 26974 + 3.A.1.132.6
Gene ID: HRGMv2_0177_71_10
Type: TC
Location: 9153 - 12617 (+)
Gene ID: HRGMv2_0177_71_11
Type: pfam
Location: 12630 - 14615 (+)
Gene ID: HRGMv2_0177_71_12
Type: CAZyme
Location: 14633 - 15751 (+)
Gene ID: HRGMv2_0177_71_13
Type: CAZyme
Location: 16100 - 17716 (+)
Gene ID: HRGMv2_0177_71_14
Type: CAZyme
Location: 17760 - 18791 (+)
Gene ID: HRGMv2_0177_71_15
Type: CAZyme
Location: 18881 - 20686 (+)
Gene ID: HRGMv2_0177_71_16
Type: CAZyme
Location: 20739 - 22793 (+)
Gene ID: HRGMv2_0177_71_17
Type: CAZyme
Location: 22827 - 24857 (+)
Gene ID: HRGMv2_0177_71_18
Type:
Location: 24971 - 25378 (+)
Gene ID: HRGMv2_0177_71_19
Type:
Location: 25697 - 25987 (-)
Gene ID: HRGMv2_0177_71_20
Type: TC
Location: 26120 - 26974 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List