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Cluster: HRGMv2_0177_CGC68

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0177_70 HRGMv2_0177_70_50 68105 71260 + 1.B.14.6.1
pfam HRGMv2_0177_70 HRGMv2_0177_70_51 71297 73003 + SusD_RagB | SusD-like_3
pfam HRGMv2_0177_70 HRGMv2_0177_70_52 73051 74415 + DUF4960
CAZyme HRGMv2_0177_70 HRGMv2_0177_70_53 74521 76059 + GH32
NULL(UNKNOWN) HRGMv2_0177_70 HRGMv2_0177_70_54 76092 77342 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0177_70 HRGMv2_0177_70_55 77424 79511 + GH172
CAZyme HRGMv2_0177_70 HRGMv2_0177_70_56 79724 81538 + GH32
TC HRGMv2_0177_70 HRGMv2_0177_70_57 81546 82712 + 2.A.1.7.17
Gene ID: HRGMv2_0177_70_50
Type: TC
Location: 68105 - 71260 (+)
Gene ID: HRGMv2_0177_70_51
Type: pfam
Location: 71297 - 73003 (+)
Gene ID: HRGMv2_0177_70_52
Type: pfam
Location: 73051 - 74415 (+)
Gene ID: HRGMv2_0177_70_53
Type: CAZyme
Location: 74521 - 76059 (+)
Gene ID: HRGMv2_0177_70_54
Type:
Location: 76092 - 77342 (+)
Gene ID: HRGMv2_0177_70_55
Type: CAZyme
Location: 77424 - 79511 (+)
Gene ID: HRGMv2_0177_70_56
Type: CAZyme
Location: 79724 - 81538 (+)
Gene ID: HRGMv2_0177_70_57
Type: TC
Location: 81546 - 82712 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0177_70_57 vegetarian > vegan 1.31018 0.03403

🧭 Explore Read Mapping of CGC

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