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Cluster: HRGMv2_0177_CGC64

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0177_63 HRGMv2_0177_63_29 30102 32702 + PL15_2
TF HRGMv2_0177_63 HRGMv2_0177_63_30 32872 37053 + HTH_AraC
pfam HRGMv2_0177_63 HRGMv2_0177_63_31 37066 37518 + DUF6078
TC HRGMv2_0177_63 HRGMv2_0177_63_32 38062 41238 + 1.B.14.6.1
TC HRGMv2_0177_63 HRGMv2_0177_63_33 41264 43027 + 8.A.46.1.3
CAZyme HRGMv2_0177_63 HRGMv2_0177_63_34 43283 46321 + PL8_3
sulfatase HRGMv2_0177_63 HRGMv2_0177_63_35 46351 47748 + S1_14
CAZyme HRGMv2_0177_63 HRGMv2_0177_63_36 47760 48998 + GH88
Gene ID: HRGMv2_0177_63_29
Type: CAZyme
Location: 30102 - 32702 (+)
Gene ID: HRGMv2_0177_63_30
Type: TF
Location: 32872 - 37053 (+)
Gene ID: HRGMv2_0177_63_31
Type: pfam
Location: 37066 - 37518 (+)
Gene ID: HRGMv2_0177_63_32
Type: TC
Location: 38062 - 41238 (+)
Gene ID: HRGMv2_0177_63_33
Type: TC
Location: 41264 - 43027 (+)
Gene ID: HRGMv2_0177_63_34
Type: CAZyme
Location: 43283 - 46321 (+)
Gene ID: HRGMv2_0177_63_35
Type: sulfatase
Location: 46351 - 47748 (+)
Gene ID: HRGMv2_0177_63_36
Type: CAZyme
Location: 47760 - 48998 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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