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Cluster: HRGMv2_0177_CGC63

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0177_61 HRGMv2_0177_61_49 50543 51679 - GT4
NULL(UNKNOWN) HRGMv2_0177_61 HRGMv2_0177_61_50 52649 52738 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0177_61 HRGMv2_0177_61_51 52786 53925 + GT4
pfam HRGMv2_0177_61 HRGMv2_0177_61_52 55313 56119 + Poly_export | SLBB_2
TC HRGMv2_0177_61 HRGMv2_0177_61_53 56140 58404 + 8.A.3.3.1
TC HRGMv2_0177_61 HRGMv2_0177_61_54 58418 59782 + 2.A.66.10.1
NULL(UNKNOWN) HRGMv2_0177_61 HRGMv2_0177_61_55 59770 61026 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0177_61 HRGMv2_0177_61_56 61011 62258 + GT4
pfam HRGMv2_0177_61 HRGMv2_0177_61_57 62266 62904 + Hexapep | Hexapep_2
CAZyme HRGMv2_0177_61 HRGMv2_0177_61_58 62907 63683 + GT2
Gene ID: HRGMv2_0177_61_49
Type: CAZyme
Location: 50543 - 51679 (-)
Gene ID: HRGMv2_0177_61_50
Type:
Location: 52649 - 52738 (+)
Gene ID: HRGMv2_0177_61_51
Type: CAZyme
Location: 52786 - 53925 (+)
Gene ID: HRGMv2_0177_61_52
Type: pfam
Location: 55313 - 56119 (+)
Gene ID: HRGMv2_0177_61_53
Type: TC
Location: 56140 - 58404 (+)
Gene ID: HRGMv2_0177_61_54
Type: TC
Location: 58418 - 59782 (+)
Gene ID: HRGMv2_0177_61_55
Type:
Location: 59770 - 61026 (+)
Gene ID: HRGMv2_0177_61_56
Type: CAZyme
Location: 61011 - 62258 (+)
Gene ID: HRGMv2_0177_61_57
Type: pfam
Location: 62266 - 62904 (+)
Gene ID: HRGMv2_0177_61_58
Type: CAZyme
Location: 62907 - 63683 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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