Cluster: HRGMv2_0177_CGC58
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_0177
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0177_59 | HRGMv2_0177_59_61 | 92484 | 95552 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0177_59 | HRGMv2_0177_59_62 | 95567 | 97384 | + | SusD_RagB | SusD-like_3 |
| pfam | HRGMv2_0177_59 | HRGMv2_0177_59_63 | 97406 | 98557 | + | SusE |
| CAZyme | HRGMv2_0177_59 | HRGMv2_0177_59_64 | 98630 | 100372 | + | CBM35 |
| CAZyme | HRGMv2_0177_59 | HRGMv2_0177_59_65 | 100600 | 102903 | + | GH76 |
| TF | HRGMv2_0177_59 | HRGMv2_0177_59_66 | 103841 | 107899 | + | HTH_AraC |
| CAZyme | HRGMv2_0177_59 | HRGMv2_0177_59_67 | 108158 | 111751 | + | GH2 |
| CAZyme | HRGMv2_0177_59 | HRGMv2_0177_59_68 | 112458 | 113636 | + | GH130_3 |
| CAZyme | HRGMv2_0177_59 | HRGMv2_0177_59_69 | 114033 | 116390 | + | GH92 |
| CAZyme | HRGMv2_0177_59 | HRGMv2_0177_59_70 | 116402 | 118894 | + | GH115 |
| CAZyme | HRGMv2_0177_59 | HRGMv2_0177_59_71 | 119045 | 122152 | + | GH2 |
| STP | HRGMv2_0177_59 | HRGMv2_0177_59_72 | 122235 | 122735 | + | Sigma70_r2 | Sigma70_r4_2 |
| STP | HRGMv2_0177_59 | HRGMv2_0177_59_73 | 122809 | 123780 | + | FecR |
| TC | HRGMv2_0177_59 | HRGMv2_0177_59_74 | 123967 | 127554 | + | 1.B.14.6.1 |
Gene ID: HRGMv2_0177_59_61
Type: TC
Location: 92484 - 95552 (+)
Type: TC
Location: 92484 - 95552 (+)
Gene ID: HRGMv2_0177_59_62
Type: pfam
Location: 95567 - 97384 (+)
Type: pfam
Location: 95567 - 97384 (+)
Gene ID: HRGMv2_0177_59_63
Type: pfam
Location: 97406 - 98557 (+)
Type: pfam
Location: 97406 - 98557 (+)
Gene ID: HRGMv2_0177_59_64
Type: CAZyme
Location: 98630 - 100372 (+)
Type: CAZyme
Location: 98630 - 100372 (+)
Gene ID: HRGMv2_0177_59_65
Type: CAZyme
Location: 100600 - 102903 (+)
Type: CAZyme
Location: 100600 - 102903 (+)
Gene ID: HRGMv2_0177_59_66
Type: TF
Location: 103841 - 107899 (+)
Type: TF
Location: 103841 - 107899 (+)
Gene ID: HRGMv2_0177_59_67
Type: CAZyme
Location: 108158 - 111751 (+)
Type: CAZyme
Location: 108158 - 111751 (+)
Gene ID: HRGMv2_0177_59_68
Type: CAZyme
Location: 112458 - 113636 (+)
Type: CAZyme
Location: 112458 - 113636 (+)
Gene ID: HRGMv2_0177_59_69
Type: CAZyme
Location: 114033 - 116390 (+)
Type: CAZyme
Location: 114033 - 116390 (+)
Gene ID: HRGMv2_0177_59_70
Type: CAZyme
Location: 116402 - 118894 (+)
Type: CAZyme
Location: 116402 - 118894 (+)
Gene ID: HRGMv2_0177_59_71
Type: CAZyme
Location: 119045 - 122152 (+)
Type: CAZyme
Location: 119045 - 122152 (+)
Gene ID: HRGMv2_0177_59_72
Type: STP
Location: 122235 - 122735 (+)
Type: STP
Location: 122235 - 122735 (+)
Gene ID: HRGMv2_0177_59_73
Type: STP
Location: 122809 - 123780 (+)
Type: STP
Location: 122809 - 123780 (+)
Gene ID: HRGMv2_0177_59_74
Type: TC
Location: 123967 - 127554 (+)
Type: TC
Location: 123967 - 127554 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900762525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.