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Cluster: HRGMv2_0177_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0177_57 HRGMv2_0177_57_57 56776 59439 - CBM35
pfam HRGMv2_0177_57 HRGMv2_0177_57_58 59621 60745 - Por_Secre_tail
CAZyme HRGMv2_0177_57 HRGMv2_0177_57_59 60799 63987 - GH66
TC HRGMv2_0177_57 HRGMv2_0177_57_60 64005 65537 - 8.A.46.1.3
TC HRGMv2_0177_57 HRGMv2_0177_57_61 65550 68675 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0177_57 HRGMv2_0177_57_62 68730 68825 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0177_57 HRGMv2_0177_57_63 68873 70303 - 2.A.1.1.42
Gene ID: HRGMv2_0177_57_57
Type: CAZyme
Location: 56776 - 59439 (-)
Gene ID: HRGMv2_0177_57_58
Type: pfam
Location: 59621 - 60745 (-)
Gene ID: HRGMv2_0177_57_59
Type: CAZyme
Location: 60799 - 63987 (-)
Gene ID: HRGMv2_0177_57_60
Type: TC
Location: 64005 - 65537 (-)
Gene ID: HRGMv2_0177_57_61
Type: TC
Location: 65550 - 68675 (-)
Gene ID: HRGMv2_0177_57_62
Type:
Location: 68730 - 68825 (-)
Gene ID: HRGMv2_0177_57_63
Type: TC
Location: 68873 - 70303 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0177_57_62 vegan > omnivore 2.21428 0.04328

🧭 Explore Read Mapping of CGC

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