Cluster: HRGMv2_0177_CGC45
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 8
- Substrate: pectin
- Genome ID: HRGMv2_0177
- CGC Family ID: CGCFAM_00298
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0177_50 | HRGMv2_0177_50_102 | 117967 | 120495 | + | CE20 | GH105 |
| CAZyme | HRGMv2_0177_50 | HRGMv2_0177_50_103 | 120607 | 123336 | + | GH106 |
| CAZyme | HRGMv2_0177_50 | HRGMv2_0177_50_104 | 123329 | 125161 | + | PL11 |
| CAZyme | HRGMv2_0177_50 | HRGMv2_0177_50_105 | 125193 | 126722 | + | GH28 |
| CAZyme | HRGMv2_0177_50 | HRGMv2_0177_50_106 | 126810 | 128243 | + | GH28 |
| pfam | HRGMv2_0177_50 | HRGMv2_0177_50_107 | 128260 | 129717 | + | FGGY_N | FGGY_C |
| pfam | HRGMv2_0177_50 | HRGMv2_0177_50_108 | 129714 | 130970 | + | RhaA |
| TC | HRGMv2_0177_50 | HRGMv2_0177_50_109 | 131085 | 132116 | + | 2.A.7.6.1 |
| pfam | HRGMv2_0177_50 | HRGMv2_0177_50_110 | 132261 | 133070 | + | Aldolase_II |
| CAZyme | HRGMv2_0177_50 | HRGMv2_0177_50_111 | 133091 | 134389 | + | GH105 |
| NULL(UNKNOWN) | HRGMv2_0177_50 | HRGMv2_0177_50_112 | 134443 | 134559 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0177_50 | HRGMv2_0177_50_113 | 134912 | 136906 | + | CBM89 |
| CAZyme | HRGMv2_0177_50 | HRGMv2_0177_50_114 | 137075 | 139990 | + | PL1_2 |
| pfam | HRGMv2_0177_50 | HRGMv2_0177_50_115 | 140008 | 142254 | + | Fasciclin |
| TC | HRGMv2_0177_50 | HRGMv2_0177_50_116 | 142269 | 145541 | + | 1.B.14.6.1 |
Gene ID: HRGMv2_0177_50_102
Type: CAZyme
Location: 117967 - 120495 (+)
Type: CAZyme
Location: 117967 - 120495 (+)
Gene ID: HRGMv2_0177_50_103
Type: CAZyme
Location: 120607 - 123336 (+)
Type: CAZyme
Location: 120607 - 123336 (+)
Gene ID: HRGMv2_0177_50_104
Type: CAZyme
Location: 123329 - 125161 (+)
Type: CAZyme
Location: 123329 - 125161 (+)
Gene ID: HRGMv2_0177_50_105
Type: CAZyme
Location: 125193 - 126722 (+)
Type: CAZyme
Location: 125193 - 126722 (+)
Gene ID: HRGMv2_0177_50_106
Type: CAZyme
Location: 126810 - 128243 (+)
Type: CAZyme
Location: 126810 - 128243 (+)
Gene ID: HRGMv2_0177_50_107
Type: pfam
Location: 128260 - 129717 (+)
Type: pfam
Location: 128260 - 129717 (+)
Gene ID: HRGMv2_0177_50_108
Type: pfam
Location: 129714 - 130970 (+)
Type: pfam
Location: 129714 - 130970 (+)
Gene ID: HRGMv2_0177_50_109
Type: TC
Location: 131085 - 132116 (+)
Type: TC
Location: 131085 - 132116 (+)
Gene ID: HRGMv2_0177_50_110
Type: pfam
Location: 132261 - 133070 (+)
Type: pfam
Location: 132261 - 133070 (+)
Gene ID: HRGMv2_0177_50_111
Type: CAZyme
Location: 133091 - 134389 (+)
Type: CAZyme
Location: 133091 - 134389 (+)
Gene ID: HRGMv2_0177_50_112
Type:
Location: 134443 - 134559 (+)
Type:
Location: 134443 - 134559 (+)
Gene ID: HRGMv2_0177_50_113
Type: CAZyme
Location: 134912 - 136906 (+)
Type: CAZyme
Location: 134912 - 136906 (+)
Gene ID: HRGMv2_0177_50_114
Type: CAZyme
Location: 137075 - 139990 (+)
Type: CAZyme
Location: 137075 - 139990 (+)
Gene ID: HRGMv2_0177_50_115
Type: pfam
Location: 140008 - 142254 (+)
Type: pfam
Location: 140008 - 142254 (+)
Gene ID: HRGMv2_0177_50_116
Type: TC
Location: 142269 - 145541 (+)
Type: TC
Location: 142269 - 145541 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900762525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.