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Cluster: HRGMv2_0177_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0177_44 HRGMv2_0177_44_141 199940 203236 - 1.B.14.6.1
CAZyme HRGMv2_0177_44 HRGMv2_0177_44_142 203338 204639 - CE7
peptidase HRGMv2_0177_44 HRGMv2_0177_44_143 204799 205704 + S09.UPW
pfam HRGMv2_0177_44 HRGMv2_0177_44_144 205798 206451 - Hydrolase | HAD | Hydrolase_like | HAD_2
CAZyme HRGMv2_0177_44 HRGMv2_0177_44_145 206579 208255 - CBM91 | GH43_10
NULL(UNKNOWN) HRGMv2_0177_44 HRGMv2_0177_44_146 208449 209150 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0177_44 HRGMv2_0177_44_147 209265 210485 - DUF4861
CAZyme HRGMv2_0177_44 HRGMv2_0177_44_148 210695 212305 - GH28
Gene ID: HRGMv2_0177_44_141
Type: TC
Location: 199940 - 203236 (-)
Gene ID: HRGMv2_0177_44_142
Type: CAZyme
Location: 203338 - 204639 (-)
Gene ID: HRGMv2_0177_44_143
Type: peptidase
Location: 204799 - 205704 (+)
Gene ID: HRGMv2_0177_44_144
Type: pfam
Location: 205798 - 206451 (-)
Gene ID: HRGMv2_0177_44_145
Type: CAZyme
Location: 206579 - 208255 (-)
Gene ID: HRGMv2_0177_44_146
Type:
Location: 208449 - 209150 (-)
Gene ID: HRGMv2_0177_44_147
Type: pfam
Location: 209265 - 210485 (-)
Gene ID: HRGMv2_0177_44_148
Type: CAZyme
Location: 210695 - 212305 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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