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Cluster: HRGMv2_0177_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0177_44 HRGMv2_0177_44_90 115421 116677 + 1.A.23.4.5
TF HRGMv2_0177_44 HRGMv2_0177_44_91 116705 117598 + HTH_AraC | HTH_AraC
TC HRGMv2_0177_44 HRGMv2_0177_44_92 117635 118621 - 8.A.5.1.3
CAZyme HRGMv2_0177_44 HRGMv2_0177_44_93 118936 120114 + GH130_1
TC HRGMv2_0177_44 HRGMv2_0177_44_94 120225 121592 + 2.A.2.3.6
pfam HRGMv2_0177_44 HRGMv2_0177_44_95 121812 123059 + GlcNAc_2-epim
NULL(UNKNOWN) HRGMv2_0177_44 HRGMv2_0177_44_96 123301 124812 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0177_44 HRGMv2_0177_44_97 124838 127636 - 1.B.14.12.3
STP HRGMv2_0177_44 HRGMv2_0177_44_98 127853 130669 + GAF | HATPase_c | HisKA
TC HRGMv2_0177_44 HRGMv2_0177_44_99 130760 132202 - 3.D.9.1.1
TC HRGMv2_0177_44 HRGMv2_0177_44_100 132238 133683 - 3.D.1.5.1
TC HRGMv2_0177_44 HRGMv2_0177_44_101 133771 135660 - 3.D.9.1.1
TC HRGMv2_0177_44 HRGMv2_0177_44_102 135707 136018 - 3.D.1.2.1
pfam HRGMv2_0177_44 HRGMv2_0177_44_103 136133 136645 - Oxidored_q3
STP HRGMv2_0177_44 HRGMv2_0177_44_104 136738 137208 - Fer4 | Fer4
TC HRGMv2_0177_44 HRGMv2_0177_44_105 137274 138350 - 3.D.1.5.1
TC HRGMv2_0177_44 HRGMv2_0177_44_106 138488 140080 - 3.D.1.5.1
TC HRGMv2_0177_44 HRGMv2_0177_44_107 140178 140765 - 3.D.1.6.1
TC HRGMv2_0177_44 HRGMv2_0177_44_108 140756 141106 - 3.D.1.8.1
TC HRGMv2_0177_44 HRGMv2_0177_44_109 141817 143208 - 2.A.38.1.1
Gene ID: HRGMv2_0177_44_90
Type: TC
Location: 115421 - 116677 (+)
Gene ID: HRGMv2_0177_44_91
Type: TF
Location: 116705 - 117598 (+)
Gene ID: HRGMv2_0177_44_92
Type: TC
Location: 117635 - 118621 (-)
Gene ID: HRGMv2_0177_44_93
Type: CAZyme
Location: 118936 - 120114 (+)
Gene ID: HRGMv2_0177_44_94
Type: TC
Location: 120225 - 121592 (+)
Gene ID: HRGMv2_0177_44_95
Type: pfam
Location: 121812 - 123059 (+)
Gene ID: HRGMv2_0177_44_96
Type:
Location: 123301 - 124812 (-)
Gene ID: HRGMv2_0177_44_97
Type: TC
Location: 124838 - 127636 (-)
Gene ID: HRGMv2_0177_44_98
Type: STP
Location: 127853 - 130669 (+)
Gene ID: HRGMv2_0177_44_99
Type: TC
Location: 130760 - 132202 (-)
Gene ID: HRGMv2_0177_44_100
Type: TC
Location: 132238 - 133683 (-)
Gene ID: HRGMv2_0177_44_101
Type: TC
Location: 133771 - 135660 (-)
Gene ID: HRGMv2_0177_44_102
Type: TC
Location: 135707 - 136018 (-)
Gene ID: HRGMv2_0177_44_103
Type: pfam
Location: 136133 - 136645 (-)
Gene ID: HRGMv2_0177_44_104
Type: STP
Location: 136738 - 137208 (-)
Gene ID: HRGMv2_0177_44_105
Type: TC
Location: 137274 - 138350 (-)
Gene ID: HRGMv2_0177_44_106
Type: TC
Location: 138488 - 140080 (-)
Gene ID: HRGMv2_0177_44_107
Type: TC
Location: 140178 - 140765 (-)
Gene ID: HRGMv2_0177_44_108
Type: TC
Location: 140756 - 141106 (-)
Gene ID: HRGMv2_0177_44_109
Type: TC
Location: 141817 - 143208 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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