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Cluster: HRGMv2_0177_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0177_41 HRGMv2_0177_41_6 10384 11589 - GT2
pfam HRGMv2_0177_41 HRGMv2_0177_41_7 11602 13026 - Polysacc_deac_3
CAZyme HRGMv2_0177_41 HRGMv2_0177_41_8 13040 13888 - GT2
CAZyme HRGMv2_0177_41 HRGMv2_0177_41_9 13885 15033 - GT4
CAZyme HRGMv2_0177_41 HRGMv2_0177_41_10 15030 15938 - GT101
CAZyme HRGMv2_0177_41 HRGMv2_0177_41_11 15935 17125 - GT4
CAZyme HRGMv2_0177_41 HRGMv2_0177_41_12 17086 18195 - GT4
TC HRGMv2_0177_41 HRGMv2_0177_41_13 18224 19684 - 2.A.66.2.23
CAZyme HRGMv2_0177_41 HRGMv2_0177_41_14 19693 20772 - GT94
NULL(UNKNOWN) HRGMv2_0177_41 HRGMv2_0177_41_15 20940 21056 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0177_41 HRGMv2_0177_41_16 21257 22444 - GT2
CAZyme HRGMv2_0177_41 HRGMv2_0177_41_17 22432 23346 - GT2
Gene ID: HRGMv2_0177_41_6
Type: CAZyme
Location: 10384 - 11589 (-)
Gene ID: HRGMv2_0177_41_7
Type: pfam
Location: 11602 - 13026 (-)
Gene ID: HRGMv2_0177_41_8
Type: CAZyme
Location: 13040 - 13888 (-)
Gene ID: HRGMv2_0177_41_9
Type: CAZyme
Location: 13885 - 15033 (-)
Gene ID: HRGMv2_0177_41_10
Type: CAZyme
Location: 15030 - 15938 (-)
Gene ID: HRGMv2_0177_41_11
Type: CAZyme
Location: 15935 - 17125 (-)
Gene ID: HRGMv2_0177_41_12
Type: CAZyme
Location: 17086 - 18195 (-)
Gene ID: HRGMv2_0177_41_13
Type: TC
Location: 18224 - 19684 (-)
Gene ID: HRGMv2_0177_41_14
Type: CAZyme
Location: 19693 - 20772 (-)
Gene ID: HRGMv2_0177_41_15
Type:
Location: 20940 - 21056 (-)
Gene ID: HRGMv2_0177_41_16
Type: CAZyme
Location: 21257 - 22444 (-)
Gene ID: HRGMv2_0177_41_17
Type: CAZyme
Location: 22432 - 23346 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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