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Cluster: HRGMv2_0177_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0177_38 HRGMv2_0177_38_8 7613 9262 + 4.C.1.1.7
peptidase HRGMv2_0177_38 HRGMv2_0177_38_9 9347 12238 - M43.UPA
CAZyme HRGMv2_0177_38 HRGMv2_0177_38_10 12286 14220 - GH63
CAZyme HRGMv2_0177_38 HRGMv2_0177_38_11 14238 17378 - GH2
TC HRGMv2_0177_38 HRGMv2_0177_38_12 17398 18000 - 2.A.124.1.2
TC HRGMv2_0177_38 HRGMv2_0177_38_13 17997 18287 - 2.A.124.1.2
CAZyme HRGMv2_0177_38 HRGMv2_0177_38_14 18306 20987 - GH63
pfam HRGMv2_0177_38 HRGMv2_0177_38_15 21144 21980 - Por_Secre_tail | GEVED
peptidase HRGMv2_0177_38 HRGMv2_0177_38_16 22060 24669 - M43.001
TC HRGMv2_0177_38 HRGMv2_0177_38_17 24747 26267 - 8.A.46.1.3
TC HRGMv2_0177_38 HRGMv2_0177_38_18 26289 29441 - 1.B.14.6.1
Gene ID: HRGMv2_0177_38_8
Type: TC
Location: 7613 - 9262 (+)
Gene ID: HRGMv2_0177_38_9
Type: peptidase
Location: 9347 - 12238 (-)
Gene ID: HRGMv2_0177_38_10
Type: CAZyme
Location: 12286 - 14220 (-)
Gene ID: HRGMv2_0177_38_11
Type: CAZyme
Location: 14238 - 17378 (-)
Gene ID: HRGMv2_0177_38_12
Type: TC
Location: 17398 - 18000 (-)
Gene ID: HRGMv2_0177_38_13
Type: TC
Location: 17997 - 18287 (-)
Gene ID: HRGMv2_0177_38_14
Type: CAZyme
Location: 18306 - 20987 (-)
Gene ID: HRGMv2_0177_38_15
Type: pfam
Location: 21144 - 21980 (-)
Gene ID: HRGMv2_0177_38_16
Type: peptidase
Location: 22060 - 24669 (-)
Gene ID: HRGMv2_0177_38_17
Type: TC
Location: 24747 - 26267 (-)
Gene ID: HRGMv2_0177_38_18
Type: TC
Location: 26289 - 29441 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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