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Cluster: HRGMv2_0177_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0177_10 HRGMv2_0177_10_17 15435 17249 - GH29
CAZyme HRGMv2_0177_10 HRGMv2_0177_10_18 17367 20033 - GH2
NULL(UNKNOWN) HRGMv2_0177_10 HRGMv2_0177_10_19 20065 21195 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0177_10 HRGMv2_0177_10_20 21294 24356 - GH2
CAZyme HRGMv2_0177_10 HRGMv2_0177_10_21 24468 26792 - GH20
sulfatase HRGMv2_0177_10 HRGMv2_0177_10_22 26813 28393 - S1_11
pfam HRGMv2_0177_10 HRGMv2_0177_10_23 28755 30650 - SusD_RagB | SusD-like_3
TC HRGMv2_0177_10 HRGMv2_0177_10_24 30680 33904 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0177_10 HRGMv2_0177_10_25 33937 34527 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0177_10 HRGMv2_0177_10_26 34546 37080 - GH18
Gene ID: HRGMv2_0177_10_17
Type: CAZyme
Location: 15435 - 17249 (-)
Gene ID: HRGMv2_0177_10_18
Type: CAZyme
Location: 17367 - 20033 (-)
Gene ID: HRGMv2_0177_10_19
Type:
Location: 20065 - 21195 (-)
Gene ID: HRGMv2_0177_10_20
Type: CAZyme
Location: 21294 - 24356 (-)
Gene ID: HRGMv2_0177_10_21
Type: CAZyme
Location: 24468 - 26792 (-)
Gene ID: HRGMv2_0177_10_22
Type: sulfatase
Location: 26813 - 28393 (-)
Gene ID: HRGMv2_0177_10_23
Type: pfam
Location: 28755 - 30650 (-)
Gene ID: HRGMv2_0177_10_24
Type: TC
Location: 30680 - 33904 (-)
Gene ID: HRGMv2_0177_10_25
Type:
Location: 33937 - 34527 (-)
Gene ID: HRGMv2_0177_10_26
Type: CAZyme
Location: 34546 - 37080 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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