dbCAN Logo

Cluster: HRGMv2_0177_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0177_36 HRGMv2_0177_36_24 25389 26726 - 3.A.1.11.8
TC HRGMv2_0177_36 HRGMv2_0177_36_25 26763 27569 - 3.A.1.11.8
TC HRGMv2_0177_36 HRGMv2_0177_36_26 27563 28360 - 3.A.1.11.8
TC HRGMv2_0177_36 HRGMv2_0177_36_27 28378 29757 - 3.A.1.11.8
pfam HRGMv2_0177_36 HRGMv2_0177_36_28 29902 31002 + Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 | DUF4369
CAZyme HRGMv2_0177_36 HRGMv2_0177_36_29 31244 33808 - GT35
CAZyme HRGMv2_0177_36 HRGMv2_0177_36_30 33841 35541 - GT3
TC HRGMv2_0177_36 HRGMv2_0177_36_31 35897 36358 - 3.A.2.2.2
TC HRGMv2_0177_36 HRGMv2_0177_36_32 36416 38233 - 3.A.2.2.2
pfam HRGMv2_0177_36 HRGMv2_0177_36_33 38230 38835 - ATP-synt_D
TC HRGMv2_0177_36 HRGMv2_0177_36_34 38951 40270 - 3.A.2.3.3
TC HRGMv2_0177_36 HRGMv2_0177_36_35 40351 42111 - 3.A.2.3.3
Gene ID: HRGMv2_0177_36_24
Type: TC
Location: 25389 - 26726 (-)
Gene ID: HRGMv2_0177_36_25
Type: TC
Location: 26763 - 27569 (-)
Gene ID: HRGMv2_0177_36_26
Type: TC
Location: 27563 - 28360 (-)
Gene ID: HRGMv2_0177_36_27
Type: TC
Location: 28378 - 29757 (-)
Gene ID: HRGMv2_0177_36_28
Type: pfam
Location: 29902 - 31002 (+)
Gene ID: HRGMv2_0177_36_29
Type: CAZyme
Location: 31244 - 33808 (-)
Gene ID: HRGMv2_0177_36_30
Type: CAZyme
Location: 33841 - 35541 (-)
Gene ID: HRGMv2_0177_36_31
Type: TC
Location: 35897 - 36358 (-)
Gene ID: HRGMv2_0177_36_32
Type: TC
Location: 36416 - 38233 (-)
Gene ID: HRGMv2_0177_36_33
Type: pfam
Location: 38230 - 38835 (-)
Gene ID: HRGMv2_0177_36_34
Type: TC
Location: 38951 - 40270 (-)
Gene ID: HRGMv2_0177_36_35
Type: TC
Location: 40351 - 42111 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List