Cluster: HRGMv2_0177_CGC26
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_0177
- CGC Family ID: CGCFAM_00332
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0177_34 | HRGMv2_0177_34_66 | 98777 | 101785 | - | 1.B.14.6.1 |
| pfam | HRGMv2_0177_34 | HRGMv2_0177_34_67 | 101806 | 103608 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0177_34 | HRGMv2_0177_34_68 | 103621 | 106845 | - | 1.B.14.6.1 |
| CAZyme | HRGMv2_0177_34 | HRGMv2_0177_34_69 | 107010 | 108122 | - | CE1 |
| CAZyme | HRGMv2_0177_34 | HRGMv2_0177_34_70 | 108202 | 109770 | - | GH20 |
| CAZyme | HRGMv2_0177_34 | HRGMv2_0177_34_71 | 109780 | 112590 | - | CBM67 | GH78 |
| NULL(UNKNOWN) | HRGMv2_0177_34 | HRGMv2_0177_34_72 | 112594 | 114267 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0177_34 | HRGMv2_0177_34_73 | 114324 | 115625 | - | GH37 |
| CAZyme | HRGMv2_0177_34 | HRGMv2_0177_34_74 | 115650 | 117923 | - | GH3 |
| CAZyme | HRGMv2_0177_34 | HRGMv2_0177_34_75 | 117957 | 119687 | - | GH78 |
| TF | HRGMv2_0177_34 | HRGMv2_0177_34_76 | 119909 | 123967 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_0177_34 | HRGMv2_0177_34_77 | 124124 | 127336 | + | GH106 |
| CAZyme | HRGMv2_0177_34 | HRGMv2_0177_34_78 | 127624 | 130740 | + | GH106 |
Gene ID: HRGMv2_0177_34_66
Type: TC
Location: 98777 - 101785 (-)
Type: TC
Location: 98777 - 101785 (-)
Gene ID: HRGMv2_0177_34_67
Type: pfam
Location: 101806 - 103608 (-)
Type: pfam
Location: 101806 - 103608 (-)
Gene ID: HRGMv2_0177_34_68
Type: TC
Location: 103621 - 106845 (-)
Type: TC
Location: 103621 - 106845 (-)
Gene ID: HRGMv2_0177_34_69
Type: CAZyme
Location: 107010 - 108122 (-)
Type: CAZyme
Location: 107010 - 108122 (-)
Gene ID: HRGMv2_0177_34_70
Type: CAZyme
Location: 108202 - 109770 (-)
Type: CAZyme
Location: 108202 - 109770 (-)
Gene ID: HRGMv2_0177_34_71
Type: CAZyme
Location: 109780 - 112590 (-)
Type: CAZyme
Location: 109780 - 112590 (-)
Gene ID: HRGMv2_0177_34_72
Type:
Location: 112594 - 114267 (-)
Type:
Location: 112594 - 114267 (-)
Gene ID: HRGMv2_0177_34_73
Type: CAZyme
Location: 114324 - 115625 (-)
Type: CAZyme
Location: 114324 - 115625 (-)
Gene ID: HRGMv2_0177_34_74
Type: CAZyme
Location: 115650 - 117923 (-)
Type: CAZyme
Location: 115650 - 117923 (-)
Gene ID: HRGMv2_0177_34_75
Type: CAZyme
Location: 117957 - 119687 (-)
Type: CAZyme
Location: 117957 - 119687 (-)
Gene ID: HRGMv2_0177_34_76
Type: TF
Location: 119909 - 123967 (+)
Type: TF
Location: 119909 - 123967 (+)
Gene ID: HRGMv2_0177_34_77
Type: CAZyme
Location: 124124 - 127336 (+)
Type: CAZyme
Location: 124124 - 127336 (+)
Gene ID: HRGMv2_0177_34_78
Type: CAZyme
Location: 127624 - 130740 (+)
Type: CAZyme
Location: 127624 - 130740 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900762525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.