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Cluster: HRGMv2_0177_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0177_34 HRGMv2_0177_34_50 66409 69651 - 1.B.14.6.1
CAZyme HRGMv2_0177_34 HRGMv2_0177_34_51 70132 72384 - GH78
peptidase HRGMv2_0177_34 HRGMv2_0177_34_52 72618 73943 - M26.UPW
CAZyme HRGMv2_0177_34 HRGMv2_0177_34_53 74009 77245 - GH2
CAZyme HRGMv2_0177_34 HRGMv2_0177_34_54 77462 80167 - GH28
CAZyme HRGMv2_0177_34 HRGMv2_0177_34_55 80195 81598 - GH28
NULL(UNKNOWN) HRGMv2_0177_34 HRGMv2_0177_34_56 81665 82048 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0177_34 HRGMv2_0177_34_57 82077 83888 - SusD_RagB | SusD-like_3
TC HRGMv2_0177_34 HRGMv2_0177_34_58 83901 86996 - 1.B.14.6.1
Gene ID: HRGMv2_0177_34_50
Type: TC
Location: 66409 - 69651 (-)
Gene ID: HRGMv2_0177_34_51
Type: CAZyme
Location: 70132 - 72384 (-)
Gene ID: HRGMv2_0177_34_52
Type: peptidase
Location: 72618 - 73943 (-)
Gene ID: HRGMv2_0177_34_53
Type: CAZyme
Location: 74009 - 77245 (-)
Gene ID: HRGMv2_0177_34_54
Type: CAZyme
Location: 77462 - 80167 (-)
Gene ID: HRGMv2_0177_34_55
Type: CAZyme
Location: 80195 - 81598 (-)
Gene ID: HRGMv2_0177_34_56
Type:
Location: 81665 - 82048 (-)
Gene ID: HRGMv2_0177_34_57
Type: pfam
Location: 82077 - 83888 (-)
Gene ID: HRGMv2_0177_34_58
Type: TC
Location: 83901 - 86996 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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