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Cluster: HRGMv2_0177_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0177_33 HRGMv2_0177_33_49 71194 72432 - GH171
TC HRGMv2_0177_33 HRGMv2_0177_33_50 72454 73761 - 2.A.1.25.5
pfam HRGMv2_0177_33 HRGMv2_0177_33_51 73774 75102 - SpoIID
pfam HRGMv2_0177_33 HRGMv2_0177_33_52 75099 76037 - DUF4922
CAZyme HRGMv2_0177_33 HRGMv2_0177_33_53 76046 77512 - GT2
pfam HRGMv2_0177_33 HRGMv2_0177_33_54 77535 79394 - Metallophos | PQQ | PQQ | PQQ_2 | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4
TC HRGMv2_0177_33 HRGMv2_0177_33_55 79432 80880 - 2.A.21.3.7
CAZyme HRGMv2_0177_33 HRGMv2_0177_33_56 80937 82103 - GH171
Gene ID: HRGMv2_0177_33_49
Type: CAZyme
Location: 71194 - 72432 (-)
Gene ID: HRGMv2_0177_33_50
Type: TC
Location: 72454 - 73761 (-)
Gene ID: HRGMv2_0177_33_51
Type: pfam
Location: 73774 - 75102 (-)
Gene ID: HRGMv2_0177_33_52
Type: pfam
Location: 75099 - 76037 (-)
Gene ID: HRGMv2_0177_33_53
Type: CAZyme
Location: 76046 - 77512 (-)
Gene ID: HRGMv2_0177_33_54
Type: pfam
Location: 77535 - 79394 (-)
Gene ID: HRGMv2_0177_33_55
Type: TC
Location: 79432 - 80880 (-)
Gene ID: HRGMv2_0177_33_56
Type: CAZyme
Location: 80937 - 82103 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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