Cluster: HRGMv2_0177_CGC21
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 9
- Substrate:
- Genome ID: HRGMv2_0177
- CGC Family ID: CGCFAM_01503
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0177_32 | HRGMv2_0177_32_50 | 71073 | 72272 | + | GH76 |
| CAZyme | HRGMv2_0177_32 | HRGMv2_0177_32_51 | 72286 | 73755 | + | GH125 |
| CAZyme | HRGMv2_0177_32 | HRGMv2_0177_32_52 | 73856 | 76321 | + | GH3 |
| CAZyme | HRGMv2_0177_32 | HRGMv2_0177_32_53 | 76432 | 78414 | - | CE20 | CE20 |
| CAZyme | HRGMv2_0177_32 | HRGMv2_0177_32_54 | 78529 | 82395 | - | GH2 |
| CAZyme | HRGMv2_0177_32 | HRGMv2_0177_32_55 | 82584 | 86552 | + | GH38 |
| TF | HRGMv2_0177_32 | HRGMv2_0177_32_56 | 86605 | 90669 | + | HTH_AraC |
| peptidase | HRGMv2_0177_32 | HRGMv2_0177_32_57 | 91363 | 95118 | + | M26.UNW |
| TC | HRGMv2_0177_32 | HRGMv2_0177_32_58 | 95344 | 98505 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0177_32 | HRGMv2_0177_32_59 | 98537 | 100561 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | HRGMv2_0177_32 | HRGMv2_0177_32_60 | 100491 | 100682 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0177_32 | HRGMv2_0177_32_61 | 100741 | 103023 | + | GH92 |
| CAZyme | HRGMv2_0177_32 | HRGMv2_0177_32_62 | 103032 | 106961 | + | CBM6 | GH76 |
| CAZyme | HRGMv2_0177_32 | HRGMv2_0177_32_63 | 107010 | 111548 | + | CBM32 | GH2 |
Gene ID: HRGMv2_0177_32_50
Type: CAZyme
Location: 71073 - 72272 (+)
Type: CAZyme
Location: 71073 - 72272 (+)
Gene ID: HRGMv2_0177_32_51
Type: CAZyme
Location: 72286 - 73755 (+)
Type: CAZyme
Location: 72286 - 73755 (+)
Gene ID: HRGMv2_0177_32_52
Type: CAZyme
Location: 73856 - 76321 (+)
Type: CAZyme
Location: 73856 - 76321 (+)
Gene ID: HRGMv2_0177_32_53
Type: CAZyme
Location: 76432 - 78414 (-)
Type: CAZyme
Location: 76432 - 78414 (-)
Gene ID: HRGMv2_0177_32_54
Type: CAZyme
Location: 78529 - 82395 (-)
Type: CAZyme
Location: 78529 - 82395 (-)
Gene ID: HRGMv2_0177_32_55
Type: CAZyme
Location: 82584 - 86552 (+)
Type: CAZyme
Location: 82584 - 86552 (+)
Gene ID: HRGMv2_0177_32_56
Type: TF
Location: 86605 - 90669 (+)
Type: TF
Location: 86605 - 90669 (+)
Gene ID: HRGMv2_0177_32_57
Type: peptidase
Location: 91363 - 95118 (+)
Type: peptidase
Location: 91363 - 95118 (+)
Gene ID: HRGMv2_0177_32_58
Type: TC
Location: 95344 - 98505 (+)
Type: TC
Location: 95344 - 98505 (+)
Gene ID: HRGMv2_0177_32_59
Type: pfam
Location: 98537 - 100561 (+)
Type: pfam
Location: 98537 - 100561 (+)
Gene ID: HRGMv2_0177_32_60
Type:
Location: 100491 - 100682 (-)
Type:
Location: 100491 - 100682 (-)
Gene ID: HRGMv2_0177_32_61
Type: CAZyme
Location: 100741 - 103023 (+)
Type: CAZyme
Location: 100741 - 103023 (+)
Gene ID: HRGMv2_0177_32_62
Type: CAZyme
Location: 103032 - 106961 (+)
Type: CAZyme
Location: 103032 - 106961 (+)
Gene ID: HRGMv2_0177_32_63
Type: CAZyme
Location: 107010 - 111548 (+)
Type: CAZyme
Location: 107010 - 111548 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900762525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.