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Cluster: HRGMv2_0177_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0177_30 HRGMv2_0177_30_41 75616 78681 + 1.B.14.6.1
TC HRGMv2_0177_30 HRGMv2_0177_30_42 78693 80153 + 8.A.46.1.4
pfam HRGMv2_0177_30 HRGMv2_0177_30_43 80166 80765 + Fasciclin
CAZyme HRGMv2_0177_30 HRGMv2_0177_30_44 80762 83227 + PL8_3
pfam HRGMv2_0177_30 HRGMv2_0177_30_45 83352 84338 + CBM96
CAZyme HRGMv2_0177_30 HRGMv2_0177_30_46 84385 87720 + GH2
TF HRGMv2_0177_30 HRGMv2_0177_30_47 87772 91857 + HTH_AraC
CAZyme HRGMv2_0177_30 HRGMv2_0177_30_48 91987 95262 + GH105 | GH2
CAZyme HRGMv2_0177_30 HRGMv2_0177_30_49 95351 96733 + GH109
Gene ID: HRGMv2_0177_30_41
Type: TC
Location: 75616 - 78681 (+)
Gene ID: HRGMv2_0177_30_42
Type: TC
Location: 78693 - 80153 (+)
Gene ID: HRGMv2_0177_30_43
Type: pfam
Location: 80166 - 80765 (+)
Gene ID: HRGMv2_0177_30_44
Type: CAZyme
Location: 80762 - 83227 (+)
Gene ID: HRGMv2_0177_30_45
Type: pfam
Location: 83352 - 84338 (+)
Gene ID: HRGMv2_0177_30_46
Type: CAZyme
Location: 84385 - 87720 (+)
Gene ID: HRGMv2_0177_30_47
Type: TF
Location: 87772 - 91857 (+)
Gene ID: HRGMv2_0177_30_48
Type: CAZyme
Location: 91987 - 95262 (+)
Gene ID: HRGMv2_0177_30_49
Type: CAZyme
Location: 95351 - 96733 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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