dbCAN Logo

Cluster: HRGMv2_0177_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0177_30 HRGMv2_0177_30_16 32553 33716 + 2.A.1.7.16
pfam HRGMv2_0177_30 HRGMv2_0177_30_17 33818 34264 + Lipocalin_4
NULL(UNKNOWN) HRGMv2_0177_30 HRGMv2_0177_30_18 34282 34806 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0177_30 HRGMv2_0177_30_19 34818 37862 + 1.B.14.6.1
pfam HRGMv2_0177_30 HRGMv2_0177_30_20 37869 39524 + SusD_RagB | SusD-like_3
peptidase HRGMv2_0177_30 HRGMv2_0177_30_21 39625 42393 + I39.UPW
TC HRGMv2_0177_30 HRGMv2_0177_30_22 42406 44043 + 8.A.46.1.3
NULL(UNKNOWN) HRGMv2_0177_30 HRGMv2_0177_30_23 44077 44526 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0177_30 HRGMv2_0177_30_24 44528 46813 + GH92
peptidase HRGMv2_0177_30 HRGMv2_0177_30_25 46830 48317 + M06.UPW
CAZyme HRGMv2_0177_30 HRGMv2_0177_30_26 48609 51737 + GH92
CAZyme HRGMv2_0177_30 HRGMv2_0177_30_27 51796 53766 + GH39
NULL(UNKNOWN) HRGMv2_0177_30 HRGMv2_0177_30_28 53882 55225 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0177_30 HRGMv2_0177_30_29 55323 58499 + GH2
TC HRGMv2_0177_30 HRGMv2_0177_30_30 58651 61677 - 2.A.6.4.3
peptidase HRGMv2_0177_30 HRGMv2_0177_30_31 61945 64032 - M03.UPA
pfam HRGMv2_0177_30 HRGMv2_0177_30_32 64078 65172 - Exo_endo_phos
TC HRGMv2_0177_30 HRGMv2_0177_30_33 65176 66075 - 9.B.104.1.2
TC HRGMv2_0177_30 HRGMv2_0177_30_34 66056 66733 - 9.B.104.1.5
Gene ID: HRGMv2_0177_30_16
Type: TC
Location: 32553 - 33716 (+)
Gene ID: HRGMv2_0177_30_17
Type: pfam
Location: 33818 - 34264 (+)
Gene ID: HRGMv2_0177_30_18
Type:
Location: 34282 - 34806 (+)
Gene ID: HRGMv2_0177_30_19
Type: TC
Location: 34818 - 37862 (+)
Gene ID: HRGMv2_0177_30_20
Type: pfam
Location: 37869 - 39524 (+)
Gene ID: HRGMv2_0177_30_21
Type: peptidase
Location: 39625 - 42393 (+)
Gene ID: HRGMv2_0177_30_22
Type: TC
Location: 42406 - 44043 (+)
Gene ID: HRGMv2_0177_30_23
Type:
Location: 44077 - 44526 (+)
Gene ID: HRGMv2_0177_30_24
Type: CAZyme
Location: 44528 - 46813 (+)
Gene ID: HRGMv2_0177_30_25
Type: peptidase
Location: 46830 - 48317 (+)
Gene ID: HRGMv2_0177_30_26
Type: CAZyme
Location: 48609 - 51737 (+)
Gene ID: HRGMv2_0177_30_27
Type: CAZyme
Location: 51796 - 53766 (+)
Gene ID: HRGMv2_0177_30_28
Type:
Location: 53882 - 55225 (+)
Gene ID: HRGMv2_0177_30_29
Type: CAZyme
Location: 55323 - 58499 (+)
Gene ID: HRGMv2_0177_30_30
Type: TC
Location: 58651 - 61677 (-)
Gene ID: HRGMv2_0177_30_31
Type: peptidase
Location: 61945 - 64032 (-)
Gene ID: HRGMv2_0177_30_32
Type: pfam
Location: 64078 - 65172 (-)
Gene ID: HRGMv2_0177_30_33
Type: TC
Location: 65176 - 66075 (-)
Gene ID: HRGMv2_0177_30_34
Type: TC
Location: 66056 - 66733 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List