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Cluster: HRGMv2_0177_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0177_30 HRGMv2_0177_30_5 5761 8421 - GH110
CAZyme HRGMv2_0177_30 HRGMv2_0177_30_6 8465 10171 - GH110
TC HRGMv2_0177_30 HRGMv2_0177_30_7 10481 13624 + 1.B.14.6.1
pfam HRGMv2_0177_30 HRGMv2_0177_30_8 13643 15466 + SusD_RagB | SusD-like_3
pfam HRGMv2_0177_30 HRGMv2_0177_30_9 15488 16540 + DUF5013
CAZyme HRGMv2_0177_30 HRGMv2_0177_30_10 16630 19251 + GH2
CAZyme HRGMv2_0177_30 HRGMv2_0177_30_11 19338 21200 + GH110
Gene ID: HRGMv2_0177_30_5
Type: CAZyme
Location: 5761 - 8421 (-)
Gene ID: HRGMv2_0177_30_6
Type: CAZyme
Location: 8465 - 10171 (-)
Gene ID: HRGMv2_0177_30_7
Type: TC
Location: 10481 - 13624 (+)
Gene ID: HRGMv2_0177_30_8
Type: pfam
Location: 13643 - 15466 (+)
Gene ID: HRGMv2_0177_30_9
Type: pfam
Location: 15488 - 16540 (+)
Gene ID: HRGMv2_0177_30_10
Type: CAZyme
Location: 16630 - 19251 (+)
Gene ID: HRGMv2_0177_30_11
Type: CAZyme
Location: 19338 - 21200 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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