Cluster: HRGMv2_0177_CGC14
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0177
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0177_28 | HRGMv2_0177_28_36 | 52437 | 55700 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0177_28 | HRGMv2_0177_28_37 | 55717 | 57633 | + | SusD_RagB | SusD-like_3 |
| CAZyme | HRGMv2_0177_28 | HRGMv2_0177_28_38 | 57824 | 59701 | + | GH29 |
| CAZyme | HRGMv2_0177_28 | HRGMv2_0177_28_39 | 59739 | 61733 | + | GH20 |
| pfam | HRGMv2_0177_28 | HRGMv2_0177_28_40 | 62243 | 63895 | + | Fumerase | Fumerase_C |
| pfam | HRGMv2_0177_28 | HRGMv2_0177_28_41 | 64000 | 65160 | + | Acyl_transf_3 |
| CAZyme | HRGMv2_0177_28 | HRGMv2_0177_28_42 | 65283 | 66788 | - | CBM91 | GH43_9 |
| CAZyme | HRGMv2_0177_28 | HRGMv2_0177_28_43 | 67075 | 68169 | - | PL10_1 |
| pfam | HRGMv2_0177_28 | HRGMv2_0177_28_44 | 68357 | 69706 | - | OEP | OEP |
| TC | HRGMv2_0177_28 | HRGMv2_0177_28_45 | 69716 | 72793 | - | 2.A.6.2.33 |
| TC | HRGMv2_0177_28 | HRGMv2_0177_28_46 | 72806 | 73885 | - | 2.A.6.2.28 |
| pfam | HRGMv2_0177_28 | HRGMv2_0177_28_47 | 74014 | 74946 | - | MMR_HSR1 | RsgA_GTPase | RsgA_N |
| pfam | HRGMv2_0177_28 | HRGMv2_0177_28_48 | 75050 | 75610 | - | RRF |
| TC | HRGMv2_0177_28 | HRGMv2_0177_28_49 | 76349 | 79870 | + | 1.B.14.6.13 |
| TC | HRGMv2_0177_28 | HRGMv2_0177_28_50 | 79882 | 81534 | + | 8.A.46.2.2 |
| NULL(UNKNOWN) | HRGMv2_0177_28 | HRGMv2_0177_28_51 | 81546 | 82526 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0177_28 | HRGMv2_0177_28_52 | 82553 | 86221 | + | GH85 |
Gene ID: HRGMv2_0177_28_36
Type: TC
Location: 52437 - 55700 (+)
Type: TC
Location: 52437 - 55700 (+)
Gene ID: HRGMv2_0177_28_37
Type: pfam
Location: 55717 - 57633 (+)
Type: pfam
Location: 55717 - 57633 (+)
Gene ID: HRGMv2_0177_28_38
Type: CAZyme
Location: 57824 - 59701 (+)
Type: CAZyme
Location: 57824 - 59701 (+)
Gene ID: HRGMv2_0177_28_39
Type: CAZyme
Location: 59739 - 61733 (+)
Type: CAZyme
Location: 59739 - 61733 (+)
Gene ID: HRGMv2_0177_28_40
Type: pfam
Location: 62243 - 63895 (+)
Type: pfam
Location: 62243 - 63895 (+)
Gene ID: HRGMv2_0177_28_41
Type: pfam
Location: 64000 - 65160 (+)
Type: pfam
Location: 64000 - 65160 (+)
Gene ID: HRGMv2_0177_28_42
Type: CAZyme
Location: 65283 - 66788 (-)
Type: CAZyme
Location: 65283 - 66788 (-)
Gene ID: HRGMv2_0177_28_43
Type: CAZyme
Location: 67075 - 68169 (-)
Type: CAZyme
Location: 67075 - 68169 (-)
Gene ID: HRGMv2_0177_28_44
Type: pfam
Location: 68357 - 69706 (-)
Type: pfam
Location: 68357 - 69706 (-)
Gene ID: HRGMv2_0177_28_45
Type: TC
Location: 69716 - 72793 (-)
Type: TC
Location: 69716 - 72793 (-)
Gene ID: HRGMv2_0177_28_46
Type: TC
Location: 72806 - 73885 (-)
Type: TC
Location: 72806 - 73885 (-)
Gene ID: HRGMv2_0177_28_47
Type: pfam
Location: 74014 - 74946 (-)
Type: pfam
Location: 74014 - 74946 (-)
Gene ID: HRGMv2_0177_28_48
Type: pfam
Location: 75050 - 75610 (-)
Type: pfam
Location: 75050 - 75610 (-)
Gene ID: HRGMv2_0177_28_49
Type: TC
Location: 76349 - 79870 (+)
Type: TC
Location: 76349 - 79870 (+)
Gene ID: HRGMv2_0177_28_50
Type: TC
Location: 79882 - 81534 (+)
Type: TC
Location: 79882 - 81534 (+)
Gene ID: HRGMv2_0177_28_51
Type:
Location: 81546 - 82526 (+)
Type:
Location: 81546 - 82526 (+)
Gene ID: HRGMv2_0177_28_52
Type: CAZyme
Location: 82553 - 86221 (+)
Type: CAZyme
Location: 82553 - 86221 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900762525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.