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Cluster: HRGMv2_0177_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0177_26 HRGMv2_0177_26_21 24384 26348 + CE20 | CE20
CAZyme HRGMv2_0177_26 HRGMv2_0177_26_22 26462 28618 + GH36
CAZyme HRGMv2_0177_26 HRGMv2_0177_26_23 28679 30883 + GH92
CAZyme HRGMv2_0177_26 HRGMv2_0177_26_24 30895 32661 + GH110
CAZyme HRGMv2_0177_26 HRGMv2_0177_26_25 32690 35092 + GH95
TF HRGMv2_0177_26 HRGMv2_0177_26_26 35156 35992 - 0035607
TC HRGMv2_0177_26 HRGMv2_0177_26_27 36105 37418 + 2.A.115.2.14
Gene ID: HRGMv2_0177_26_21
Type: CAZyme
Location: 24384 - 26348 (+)
Gene ID: HRGMv2_0177_26_22
Type: CAZyme
Location: 26462 - 28618 (+)
Gene ID: HRGMv2_0177_26_23
Type: CAZyme
Location: 28679 - 30883 (+)
Gene ID: HRGMv2_0177_26_24
Type: CAZyme
Location: 30895 - 32661 (+)
Gene ID: HRGMv2_0177_26_25
Type: CAZyme
Location: 32690 - 35092 (+)
Gene ID: HRGMv2_0177_26_26
Type: TF
Location: 35156 - 35992 (-)
Gene ID: HRGMv2_0177_26_27
Type: TC
Location: 36105 - 37418 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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