dbCAN HGM

Cluster: HRGMv2_0175_CGC8

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_0175_1	HRGMv2_0175_1_306	338414	340072	+	GH26
CAZyme	HRGMv2_0175_1	HRGMv2_0175_1_307	340144	341115	+	GH5_2
CAZyme	HRGMv2_0175_1	HRGMv2_0175_1_308	341360	343129	+	CE7
CAZyme	HRGMv2_0175_1	HRGMv2_0175_1_309	343132	344427	+	GH5_7
CAZyme	HRGMv2_0175_1	HRGMv2_0175_1_310	344498	345670	+	GH130_1
TC	HRGMv2_0175_1	HRGMv2_0175_1_311	345813	347243	+	2.A.2.3.6
pfam	HRGMv2_0175_1	HRGMv2_0175_1_312	347247	348413	+	Glyco_hydro_76 \| C5-epim_C \| GlcNAc_2-epim
CAZyme	HRGMv2_0175_1	HRGMv2_0175_1_313	348430	350868	+	GH94
CAZyme	HRGMv2_0175_1	HRGMv2_0175_1_314	351047	353359	+	GH3
CAZyme	HRGMv2_0175_1	HRGMv2_0175_1_315	353503	354612	+	GH26
CAZyme	HRGMv2_0175_1	HRGMv2_0175_1_316	354770	355894	+	GH26

Gene ID: HRGMv2_0175_1_306
Type: CAZyme
Location: 338414 - 340072 (+)

Gene ID: HRGMv2_0175_1_307
Type: CAZyme
Location: 340144 - 341115 (+)

Gene ID: HRGMv2_0175_1_308
Type: CAZyme
Location: 341360 - 343129 (+)

Gene ID: HRGMv2_0175_1_309
Type: CAZyme
Location: 343132 - 344427 (+)

Gene ID: HRGMv2_0175_1_310
Type: CAZyme
Location: 344498 - 345670 (+)

Gene ID: HRGMv2_0175_1_311
Type: TC
Location: 345813 - 347243 (+)

Gene ID: HRGMv2_0175_1_312
Type: pfam
Location: 347247 - 348413 (+)

Gene ID: HRGMv2_0175_1_313
Type: CAZyme
Location: 348430 - 350868 (+)

Gene ID: HRGMv2_0175_1_314
Type: CAZyme
Location: 351047 - 353359 (+)

Gene ID: HRGMv2_0175_1_315
Type: CAZyme
Location: 353503 - 354612 (+)

Gene ID: HRGMv2_0175_1_316
Type: CAZyme
Location: 354770 - 355894 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.