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Cluster: HRGMv2_0175_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0175_1 HRGMv2_0175_1_107 118785 120140 - 2.A.66.1.28
pfam HRGMv2_0175_1 HRGMv2_0175_1_108 120201 120554 - Asp_decarbox
pfam HRGMv2_0175_1 HRGMv2_0175_1_109 120570 121421 - Pantoate_ligase
CAZyme HRGMv2_0175_1 HRGMv2_0175_1_110 121651 122457 + GT5
pfam HRGMv2_0175_1 HRGMv2_0175_1_111 122555 123967 + DUF4270
NULL(UNKNOWN) HRGMv2_0175_1 HRGMv2_0175_1_112 123985 124365 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0175_1 HRGMv2_0175_1_113 124563 126848 + 1.B.14.1.4
TC HRGMv2_0175_1 HRGMv2_0175_1_114 127163 127810 + 2.A.76.1.6
Gene ID: HRGMv2_0175_1_107
Type: TC
Location: 118785 - 120140 (-)
Gene ID: HRGMv2_0175_1_108
Type: pfam
Location: 120201 - 120554 (-)
Gene ID: HRGMv2_0175_1_109
Type: pfam
Location: 120570 - 121421 (-)
Gene ID: HRGMv2_0175_1_110
Type: CAZyme
Location: 121651 - 122457 (+)
Gene ID: HRGMv2_0175_1_111
Type: pfam
Location: 122555 - 123967 (+)
Gene ID: HRGMv2_0175_1_112
Type:
Location: 123985 - 124365 (+)
Gene ID: HRGMv2_0175_1_113
Type: TC
Location: 124563 - 126848 (+)
Gene ID: HRGMv2_0175_1_114
Type: TC
Location: 127163 - 127810 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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