Cluster: HRGMv2_0175_CGC44
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 10
- Substrate: xylan
- Genome ID: HRGMv2_0175
- CGC Family ID: CGCFAM_06414
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0175_12 | HRGMv2_0175_12_32 | 39682 | 41757 | - | 8.A.46.1.6 |
| TC | HRGMv2_0175_12 | HRGMv2_0175_12_33 | 41777 | 44968 | - | 1.B.14.6.1 |
| TF | HRGMv2_0175_12 | HRGMv2_0175_12_34 | 45751 | 49758 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_0175_12 | HRGMv2_0175_12_35 | 50075 | 51448 | - | CBM6 | GH43_29 |
| pfam | HRGMv2_0175_12 | HRGMv2_0175_12_36 | 51470 | 52309 | - | adh_short | Epimerase | KR | adh_short_C2 |
| pfam | HRGMv2_0175_12 | HRGMv2_0175_12_37 | 52306 | 53478 | - | UxuA |
| CAZyme | HRGMv2_0175_12 | HRGMv2_0175_12_38 | 53486 | 55516 | - | GH67 |
| CAZyme | HRGMv2_0175_12 | HRGMv2_0175_12_39 | 55620 | 56594 | - | GH43_1 |
| CAZyme | HRGMv2_0175_12 | HRGMv2_0175_12_40 | 56629 | 57780 | - | GH10 |
| TC | HRGMv2_0175_12 | HRGMv2_0175_12_41 | 57806 | 59218 | - | 2.A.2.3.2 |
| CAZyme | HRGMv2_0175_12 | HRGMv2_0175_12_42 | 59227 | 61161 | - | CE20 | CE20 |
| CAZyme | HRGMv2_0175_12 | HRGMv2_0175_12_43 | 61173 | 63698 | - | GH115 |
| CAZyme | HRGMv2_0175_12 | HRGMv2_0175_12_44 | 64485 | 66032 | + | CBM91 | GH43_10 |
| CAZyme | HRGMv2_0175_12 | HRGMv2_0175_12_45 | 66137 | 68107 | + | CE1 | CE1 |
| NULL(UNKNOWN) | HRGMv2_0175_12 | HRGMv2_0175_12_46 | 68166 | 68294 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0175_12 | HRGMv2_0175_12_47 | 68236 | 69192 | + | GH43_29 |
| CAZyme | HRGMv2_0175_12 | HRGMv2_0175_12_48 | 69233 | 71665 | + | GH51_2 |
| NULL(UNKNOWN) | HRGMv2_0175_12 | HRGMv2_0175_12_49 | 71809 | 72396 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0175_12 | HRGMv2_0175_12_50 | 72625 | 73521 | + | 9.B.196.1.2 |
Gene ID: HRGMv2_0175_12_32
Type: TC
Location: 39682 - 41757 (-)
Type: TC
Location: 39682 - 41757 (-)
Gene ID: HRGMv2_0175_12_33
Type: TC
Location: 41777 - 44968 (-)
Type: TC
Location: 41777 - 44968 (-)
Gene ID: HRGMv2_0175_12_34
Type: TF
Location: 45751 - 49758 (+)
Type: TF
Location: 45751 - 49758 (+)
Gene ID: HRGMv2_0175_12_35
Type: CAZyme
Location: 50075 - 51448 (-)
Type: CAZyme
Location: 50075 - 51448 (-)
Gene ID: HRGMv2_0175_12_36
Type: pfam
Location: 51470 - 52309 (-)
Type: pfam
Location: 51470 - 52309 (-)
Gene ID: HRGMv2_0175_12_37
Type: pfam
Location: 52306 - 53478 (-)
Type: pfam
Location: 52306 - 53478 (-)
Gene ID: HRGMv2_0175_12_38
Type: CAZyme
Location: 53486 - 55516 (-)
Type: CAZyme
Location: 53486 - 55516 (-)
Gene ID: HRGMv2_0175_12_39
Type: CAZyme
Location: 55620 - 56594 (-)
Type: CAZyme
Location: 55620 - 56594 (-)
Gene ID: HRGMv2_0175_12_40
Type: CAZyme
Location: 56629 - 57780 (-)
Type: CAZyme
Location: 56629 - 57780 (-)
Gene ID: HRGMv2_0175_12_41
Type: TC
Location: 57806 - 59218 (-)
Type: TC
Location: 57806 - 59218 (-)
Gene ID: HRGMv2_0175_12_42
Type: CAZyme
Location: 59227 - 61161 (-)
Type: CAZyme
Location: 59227 - 61161 (-)
Gene ID: HRGMv2_0175_12_43
Type: CAZyme
Location: 61173 - 63698 (-)
Type: CAZyme
Location: 61173 - 63698 (-)
Gene ID: HRGMv2_0175_12_44
Type: CAZyme
Location: 64485 - 66032 (+)
Type: CAZyme
Location: 64485 - 66032 (+)
Gene ID: HRGMv2_0175_12_45
Type: CAZyme
Location: 66137 - 68107 (+)
Type: CAZyme
Location: 66137 - 68107 (+)
Gene ID: HRGMv2_0175_12_46
Type:
Location: 68166 - 68294 (+)
Type:
Location: 68166 - 68294 (+)
Gene ID: HRGMv2_0175_12_47
Type: CAZyme
Location: 68236 - 69192 (+)
Type: CAZyme
Location: 68236 - 69192 (+)
Gene ID: HRGMv2_0175_12_48
Type: CAZyme
Location: 69233 - 71665 (+)
Type: CAZyme
Location: 69233 - 71665 (+)
Gene ID: HRGMv2_0175_12_49
Type:
Location: 71809 - 72396 (-)
Type:
Location: 71809 - 72396 (-)
Gene ID: HRGMv2_0175_12_50
Type: TC
Location: 72625 - 73521 (+)
Type: TC
Location: 72625 - 73521 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Species
Dysgonomonas sp900079735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.