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Cluster: HRGMv2_0175_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0175_11 HRGMv2_0175_11_14 17624 19567 - GH97
CAZyme HRGMv2_0175_11 HRGMv2_0175_11_15 19648 22296 - CBM67 | GH78
CAZyme HRGMv2_0175_11 HRGMv2_0175_11_16 22305 23783 - GH125
CAZyme HRGMv2_0175_11 HRGMv2_0175_11_17 23805 24992 - GH76
CAZyme HRGMv2_0175_11 HRGMv2_0175_11_18 24999 26150 - GH76
pfam HRGMv2_0175_11 HRGMv2_0175_11_19 26237 27364 - SusE
TC HRGMv2_0175_11 HRGMv2_0175_11_20 27404 29032 - 8.A.46.1.3
TC HRGMv2_0175_11 HRGMv2_0175_11_21 29052 32177 - 1.B.14.6.1
Gene ID: HRGMv2_0175_11_14
Type: CAZyme
Location: 17624 - 19567 (-)
Gene ID: HRGMv2_0175_11_15
Type: CAZyme
Location: 19648 - 22296 (-)
Gene ID: HRGMv2_0175_11_16
Type: CAZyme
Location: 22305 - 23783 (-)
Gene ID: HRGMv2_0175_11_17
Type: CAZyme
Location: 23805 - 24992 (-)
Gene ID: HRGMv2_0175_11_18
Type: CAZyme
Location: 24999 - 26150 (-)
Gene ID: HRGMv2_0175_11_19
Type: pfam
Location: 26237 - 27364 (-)
Gene ID: HRGMv2_0175_11_20
Type: TC
Location: 27404 - 29032 (-)
Gene ID: HRGMv2_0175_11_21
Type: TC
Location: 29052 - 32177 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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