Cluster: HRGMv2_0175_CGC38
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_0175
- CGC Family ID: CGCFAM_01496
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0175_9 | HRGMv2_0175_9_2 | 1496 | 3571 | - | GH20 |
| CAZyme | HRGMv2_0175_9 | HRGMv2_0175_9_3 | 3601 | 7209 | - | GH106 |
| CAZyme | HRGMv2_0175_9 | HRGMv2_0175_9_4 | 7264 | 9558 | - | GH92 |
| TC | HRGMv2_0175_9 | HRGMv2_0175_9_5 | 9635 | 11170 | - | 8.A.46.1.4 |
| TC | HRGMv2_0175_9 | HRGMv2_0175_9_6 | 11204 | 14596 | - | 1.B.14.6.1 |
| STP | HRGMv2_0175_9 | HRGMv2_0175_9_7 | 14746 | 15744 | - | FecR |
| TF | HRGMv2_0175_9 | HRGMv2_0175_9_8 | 15855 | 16427 | - | GerE |
| TC | HRGMv2_0175_9 | HRGMv2_0175_9_9 | 16932 | 20018 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0175_9 | HRGMv2_0175_9_10 | 20022 | 21626 | + | SusD_RagB | SusD-like_3 |
| pfam | HRGMv2_0175_9 | HRGMv2_0175_9_11 | 21638 | 22747 | + | Fib_succ_major |
| CAZyme | HRGMv2_0175_9 | HRGMv2_0175_9_12 | 22764 | 24476 | + | GH136 |
| pfam | HRGMv2_0175_9 | HRGMv2_0175_9_13 | 24489 | 26627 | + | Fib_succ_major | SusE | SusE | SusE | SusE |
| TF | HRGMv2_0175_9 | HRGMv2_0175_9_14 | 26985 | 30932 | - | HTH_AraC |
| CAZyme | HRGMv2_0175_9 | HRGMv2_0175_9_15 | 31262 | 33112 | + | GH110 |
| CAZyme | HRGMv2_0175_9 | HRGMv2_0175_9_16 | 33118 | 34695 | + | GH20 |
| CAZyme | HRGMv2_0175_9 | HRGMv2_0175_9_17 | 34705 | 36561 | + | GH110 |
| CAZyme | HRGMv2_0175_9 | HRGMv2_0175_9_18 | 36571 | 37701 | + | GH43_24 |
Gene ID: HRGMv2_0175_9_2
Type: CAZyme
Location: 1496 - 3571 (-)
Type: CAZyme
Location: 1496 - 3571 (-)
Gene ID: HRGMv2_0175_9_3
Type: CAZyme
Location: 3601 - 7209 (-)
Type: CAZyme
Location: 3601 - 7209 (-)
Gene ID: HRGMv2_0175_9_4
Type: CAZyme
Location: 7264 - 9558 (-)
Type: CAZyme
Location: 7264 - 9558 (-)
Gene ID: HRGMv2_0175_9_5
Type: TC
Location: 9635 - 11170 (-)
Type: TC
Location: 9635 - 11170 (-)
Gene ID: HRGMv2_0175_9_6
Type: TC
Location: 11204 - 14596 (-)
Type: TC
Location: 11204 - 14596 (-)
Gene ID: HRGMv2_0175_9_7
Type: STP
Location: 14746 - 15744 (-)
Type: STP
Location: 14746 - 15744 (-)
Gene ID: HRGMv2_0175_9_8
Type: TF
Location: 15855 - 16427 (-)
Type: TF
Location: 15855 - 16427 (-)
Gene ID: HRGMv2_0175_9_9
Type: TC
Location: 16932 - 20018 (+)
Type: TC
Location: 16932 - 20018 (+)
Gene ID: HRGMv2_0175_9_10
Type: pfam
Location: 20022 - 21626 (+)
Type: pfam
Location: 20022 - 21626 (+)
Gene ID: HRGMv2_0175_9_11
Type: pfam
Location: 21638 - 22747 (+)
Type: pfam
Location: 21638 - 22747 (+)
Gene ID: HRGMv2_0175_9_12
Type: CAZyme
Location: 22764 - 24476 (+)
Type: CAZyme
Location: 22764 - 24476 (+)
Gene ID: HRGMv2_0175_9_13
Type: pfam
Location: 24489 - 26627 (+)
Type: pfam
Location: 24489 - 26627 (+)
Gene ID: HRGMv2_0175_9_14
Type: TF
Location: 26985 - 30932 (-)
Type: TF
Location: 26985 - 30932 (-)
Gene ID: HRGMv2_0175_9_15
Type: CAZyme
Location: 31262 - 33112 (+)
Type: CAZyme
Location: 31262 - 33112 (+)
Gene ID: HRGMv2_0175_9_16
Type: CAZyme
Location: 33118 - 34695 (+)
Type: CAZyme
Location: 33118 - 34695 (+)
Gene ID: HRGMv2_0175_9_17
Type: CAZyme
Location: 34705 - 36561 (+)
Type: CAZyme
Location: 34705 - 36561 (+)
Gene ID: HRGMv2_0175_9_18
Type: CAZyme
Location: 36571 - 37701 (+)
Type: CAZyme
Location: 36571 - 37701 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Species
Dysgonomonas sp900079735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.