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Cluster: HRGMv2_0175_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0175_7 HRGMv2_0175_7_98 100617 101690 + GT4
pfam HRGMv2_0175_7 HRGMv2_0175_7_99 102103 102915 + Poly_export | SLBB | SLBB_2
TC HRGMv2_0175_7 HRGMv2_0175_7_100 102921 105263 + 8.A.3.3.4
pfam HRGMv2_0175_7 HRGMv2_0175_7_101 105238 106230 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
pfam HRGMv2_0175_7 HRGMv2_0175_7_102 106236 107471 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC HRGMv2_0175_7 HRGMv2_0175_7_103 107468 108892 + 2.A.66.2.6
CAZyme HRGMv2_0175_7 HRGMv2_0175_7_104 108988 109869 + GT2
CAZyme HRGMv2_0175_7 HRGMv2_0175_7_105 109878 110996 + GT4
NULL(UNKNOWN) HRGMv2_0175_7 HRGMv2_0175_7_106 111001 112155 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0175_7 HRGMv2_0175_7_107 112136 113491 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0175_7 HRGMv2_0175_7_108 113491 114639 + GT4
TC HRGMv2_0175_7 HRGMv2_0175_7_109 114639 115244 + 9.B.18.1.2
pfam HRGMv2_0175_7 HRGMv2_0175_7_110 115246 115836 + Hexapep | Hexapep | Hexapep_2 | PglD_N
STP HRGMv2_0175_7 HRGMv2_0175_7_111 115838 116980 + Aminotran_1_2
TC HRGMv2_0175_7 HRGMv2_0175_7_112 116997 118952 + 9.B.18.2.1
pfam HRGMv2_0175_7 HRGMv2_0175_7_113 119015 120337 - OEP | OEP
TC HRGMv2_0175_7 HRGMv2_0175_7_114 120449 123484 - 2.A.6.2.33
TC HRGMv2_0175_7 HRGMv2_0175_7_115 123552 124652 - 2.A.6.2.28
pfam HRGMv2_0175_7 HRGMv2_0175_7_116 125036 126244 + Hexokinase_1 | Hexokinase_2 | Hexokinase_2
peptidase HRGMv2_0175_7 HRGMv2_0175_7_117 126386 127390 + U32.UPW
TC HRGMv2_0175_7 HRGMv2_0175_7_118 127477 129060 + 3.D.10.1.3
Gene ID: HRGMv2_0175_7_98
Type: CAZyme
Location: 100617 - 101690 (+)
Gene ID: HRGMv2_0175_7_99
Type: pfam
Location: 102103 - 102915 (+)
Gene ID: HRGMv2_0175_7_100
Type: TC
Location: 102921 - 105263 (+)
Gene ID: HRGMv2_0175_7_101
Type: pfam
Location: 105238 - 106230 (+)
Gene ID: HRGMv2_0175_7_102
Type: pfam
Location: 106236 - 107471 (+)
Gene ID: HRGMv2_0175_7_103
Type: TC
Location: 107468 - 108892 (+)
Gene ID: HRGMv2_0175_7_104
Type: CAZyme
Location: 108988 - 109869 (+)
Gene ID: HRGMv2_0175_7_105
Type: CAZyme
Location: 109878 - 110996 (+)
Gene ID: HRGMv2_0175_7_106
Type:
Location: 111001 - 112155 (+)
Gene ID: HRGMv2_0175_7_107
Type:
Location: 112136 - 113491 (+)
Gene ID: HRGMv2_0175_7_108
Type: CAZyme
Location: 113491 - 114639 (+)
Gene ID: HRGMv2_0175_7_109
Type: TC
Location: 114639 - 115244 (+)
Gene ID: HRGMv2_0175_7_110
Type: pfam
Location: 115246 - 115836 (+)
Gene ID: HRGMv2_0175_7_111
Type: STP
Location: 115838 - 116980 (+)
Gene ID: HRGMv2_0175_7_112
Type: TC
Location: 116997 - 118952 (+)
Gene ID: HRGMv2_0175_7_113
Type: pfam
Location: 119015 - 120337 (-)
Gene ID: HRGMv2_0175_7_114
Type: TC
Location: 120449 - 123484 (-)
Gene ID: HRGMv2_0175_7_115
Type: TC
Location: 123552 - 124652 (-)
Gene ID: HRGMv2_0175_7_116
Type: pfam
Location: 125036 - 126244 (+)
Gene ID: HRGMv2_0175_7_117
Type: peptidase
Location: 126386 - 127390 (+)
Gene ID: HRGMv2_0175_7_118
Type: TC
Location: 127477 - 129060 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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