Cluster: HRGMv2_0175_CGC33
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_0175
- CGC Family ID: CGCFAM_08174
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0175_6 | HRGMv2_0175_6_18 | 18688 | 19995 | - | GH29 |
| TF | HRGMv2_0175_6 | HRGMv2_0175_6_19 | 20192 | 21055 | - | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_0175_6 | HRGMv2_0175_6_20 | 21312 | 22025 | - | Sf6_terminase |
| CAZyme | HRGMv2_0175_6 | HRGMv2_0175_6_21 | 22297 | 25875 | + | GH2 |
| NULL(UNKNOWN) | HRGMv2_0175_6 | HRGMv2_0175_6_22 | 26121 | 26405 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0175_6 | HRGMv2_0175_6_23 | 26452 | 27840 | - | GH29 |
| NULL(UNKNOWN) | HRGMv2_0175_6 | HRGMv2_0175_6_24 | 27916 | 28074 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0175_6 | HRGMv2_0175_6_25 | 28089 | 29735 | + | DUF6377 |
| TC | HRGMv2_0175_6 | HRGMv2_0175_6_26 | 30042 | 33032 | + | 1.B.14.6.1 |
| TC | HRGMv2_0175_6 | HRGMv2_0175_6_27 | 33045 | 34565 | + | 8.A.46.1.6 |
| pfam | HRGMv2_0175_6 | HRGMv2_0175_6_28 | 34590 | 35957 | + | DUF5016 |
| CAZyme | HRGMv2_0175_6 | HRGMv2_0175_6_29 | 36029 | 37477 | + | GH30_3 |
| CAZyme | HRGMv2_0175_6 | HRGMv2_0175_6_30 | 37552 | 39006 | + | GH30_3 |
| CAZyme | HRGMv2_0175_6 | HRGMv2_0175_6_31 | 39103 | 41328 | + | GH3 |
Gene ID: HRGMv2_0175_6_18
Type: CAZyme
Location: 18688 - 19995 (-)
Type: CAZyme
Location: 18688 - 19995 (-)
Gene ID: HRGMv2_0175_6_19
Type: TF
Location: 20192 - 21055 (-)
Type: TF
Location: 20192 - 21055 (-)
Gene ID: HRGMv2_0175_6_20
Type: pfam
Location: 21312 - 22025 (-)
Type: pfam
Location: 21312 - 22025 (-)
Gene ID: HRGMv2_0175_6_21
Type: CAZyme
Location: 22297 - 25875 (+)
Type: CAZyme
Location: 22297 - 25875 (+)
Gene ID: HRGMv2_0175_6_22
Type:
Location: 26121 - 26405 (+)
Type:
Location: 26121 - 26405 (+)
Gene ID: HRGMv2_0175_6_23
Type: CAZyme
Location: 26452 - 27840 (-)
Type: CAZyme
Location: 26452 - 27840 (-)
Gene ID: HRGMv2_0175_6_24
Type:
Location: 27916 - 28074 (-)
Type:
Location: 27916 - 28074 (-)
Gene ID: HRGMv2_0175_6_25
Type: pfam
Location: 28089 - 29735 (+)
Type: pfam
Location: 28089 - 29735 (+)
Gene ID: HRGMv2_0175_6_26
Type: TC
Location: 30042 - 33032 (+)
Type: TC
Location: 30042 - 33032 (+)
Gene ID: HRGMv2_0175_6_27
Type: TC
Location: 33045 - 34565 (+)
Type: TC
Location: 33045 - 34565 (+)
Gene ID: HRGMv2_0175_6_28
Type: pfam
Location: 34590 - 35957 (+)
Type: pfam
Location: 34590 - 35957 (+)
Gene ID: HRGMv2_0175_6_29
Type: CAZyme
Location: 36029 - 37477 (+)
Type: CAZyme
Location: 36029 - 37477 (+)
Gene ID: HRGMv2_0175_6_30
Type: CAZyme
Location: 37552 - 39006 (+)
Type: CAZyme
Location: 37552 - 39006 (+)
Gene ID: HRGMv2_0175_6_31
Type: CAZyme
Location: 39103 - 41328 (+)
Type: CAZyme
Location: 39103 - 41328 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Species
Dysgonomonas sp900079735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.