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Cluster: HRGMv2_0175_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0175_4 HRGMv2_0175_4_203 250213 251016 + 3.A.1.24.1
NULL(UNKNOWN) HRGMv2_0175_4 HRGMv2_0175_4_204 251021 251326 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0175_4 HRGMv2_0175_4_205 251321 253240 - GH43_19 | GH43_34
CAZyme HRGMv2_0175_4 HRGMv2_0175_4_206 253402 255012 - GH30_4
TC HRGMv2_0175_4 HRGMv2_0175_4_207 255091 256668 - 8.A.46.1.3
TC HRGMv2_0175_4 HRGMv2_0175_4_208 256680 259724 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0175_4 HRGMv2_0175_4_209 259760 261229 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0175_4 HRGMv2_0175_4_210 261457 265515 + HTH_AraC
CAZyme HRGMv2_0175_4 HRGMv2_0175_4_211 265682 268120 + GH2
Gene ID: HRGMv2_0175_4_203
Type: TC
Location: 250213 - 251016 (+)
Gene ID: HRGMv2_0175_4_204
Type:
Location: 251021 - 251326 (+)
Gene ID: HRGMv2_0175_4_205
Type: CAZyme
Location: 251321 - 253240 (-)
Gene ID: HRGMv2_0175_4_206
Type: CAZyme
Location: 253402 - 255012 (-)
Gene ID: HRGMv2_0175_4_207
Type: TC
Location: 255091 - 256668 (-)
Gene ID: HRGMv2_0175_4_208
Type: TC
Location: 256680 - 259724 (-)
Gene ID: HRGMv2_0175_4_209
Type:
Location: 259760 - 261229 (-)
Gene ID: HRGMv2_0175_4_210
Type: TF
Location: 261457 - 265515 (+)
Gene ID: HRGMv2_0175_4_211
Type: CAZyme
Location: 265682 - 268120 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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