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Cluster: HRGMv2_0175_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0175_4 HRGMv2_0175_4_57 56312 58699 + 1.B.14.1.14
pfam HRGMv2_0175_4 HRGMv2_0175_4_58 58888 60006 + PepSY_TM
CAZyme HRGMv2_0175_4 HRGMv2_0175_4_59 60271 63126 + GH2
CAZyme HRGMv2_0175_4 HRGMv2_0175_4_60 63179 65506 + GH92
pfam HRGMv2_0175_4 HRGMv2_0175_4_61 65571 66776 - FAD_binding_2 | DAO | Amino_oxidase | NAD_binding_8
peptidase HRGMv2_0175_4 HRGMv2_0175_4_62 67061 68674 + C26.UPW
TC HRGMv2_0175_4 HRGMv2_0175_4_63 68701 70653 + 2.A.9.3.1
pfam HRGMv2_0175_4 HRGMv2_0175_4_64 70732 71403 - BamE
pfam HRGMv2_0175_4 HRGMv2_0175_4_65 71558 72541 - FKBP_C | FKBP_N
TC HRGMv2_0175_4 HRGMv2_0175_4_66 72926 74752 + 3.A.18.1.1
Gene ID: HRGMv2_0175_4_57
Type: TC
Location: 56312 - 58699 (+)
Gene ID: HRGMv2_0175_4_58
Type: pfam
Location: 58888 - 60006 (+)
Gene ID: HRGMv2_0175_4_59
Type: CAZyme
Location: 60271 - 63126 (+)
Gene ID: HRGMv2_0175_4_60
Type: CAZyme
Location: 63179 - 65506 (+)
Gene ID: HRGMv2_0175_4_61
Type: pfam
Location: 65571 - 66776 (-)
Gene ID: HRGMv2_0175_4_62
Type: peptidase
Location: 67061 - 68674 (+)
Gene ID: HRGMv2_0175_4_63
Type: TC
Location: 68701 - 70653 (+)
Gene ID: HRGMv2_0175_4_64
Type: pfam
Location: 70732 - 71403 (-)
Gene ID: HRGMv2_0175_4_65
Type: pfam
Location: 71558 - 72541 (-)
Gene ID: HRGMv2_0175_4_66
Type: TC
Location: 72926 - 74752 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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