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Cluster: HRGMv2_0175_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0175_4 HRGMv2_0175_4_26 22562 23269 - 1.A.30.2.9
TC HRGMv2_0175_4 HRGMv2_0175_4_27 23359 24783 - 3.D.9.1.1
TC HRGMv2_0175_4 HRGMv2_0175_4_28 24825 26303 - 3.D.1.5.1
TC HRGMv2_0175_4 HRGMv2_0175_4_29 26327 28264 - 3.D.9.1.1
TC HRGMv2_0175_4 HRGMv2_0175_4_30 28286 28630 - 3.D.1.8.1
TC HRGMv2_0175_4 HRGMv2_0175_4_31 28651 29154 - 3.D.9.1.1
STP HRGMv2_0175_4 HRGMv2_0175_4_32 29179 29766 - Fer4 | Fer4
TC HRGMv2_0175_4 HRGMv2_0175_4_33 29786 30892 - 3.D.1.5.1
TC HRGMv2_0175_4 HRGMv2_0175_4_34 31004 32635 - 3.D.1.5.1
TC HRGMv2_0175_4 HRGMv2_0175_4_35 32695 33279 - 3.D.1.6.1
TC HRGMv2_0175_4 HRGMv2_0175_4_36 33270 33623 - 3.D.1.8.1
CAZyme HRGMv2_0175_4 HRGMv2_0175_4_37 33827 34753 - GT2
Gene ID: HRGMv2_0175_4_26
Type: TC
Location: 22562 - 23269 (-)
Gene ID: HRGMv2_0175_4_27
Type: TC
Location: 23359 - 24783 (-)
Gene ID: HRGMv2_0175_4_28
Type: TC
Location: 24825 - 26303 (-)
Gene ID: HRGMv2_0175_4_29
Type: TC
Location: 26327 - 28264 (-)
Gene ID: HRGMv2_0175_4_30
Type: TC
Location: 28286 - 28630 (-)
Gene ID: HRGMv2_0175_4_31
Type: TC
Location: 28651 - 29154 (-)
Gene ID: HRGMv2_0175_4_32
Type: STP
Location: 29179 - 29766 (-)
Gene ID: HRGMv2_0175_4_33
Type: TC
Location: 29786 - 30892 (-)
Gene ID: HRGMv2_0175_4_34
Type: TC
Location: 31004 - 32635 (-)
Gene ID: HRGMv2_0175_4_35
Type: TC
Location: 32695 - 33279 (-)
Gene ID: HRGMv2_0175_4_36
Type: TC
Location: 33270 - 33623 (-)
Gene ID: HRGMv2_0175_4_37
Type: CAZyme
Location: 33827 - 34753 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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