dbCAN Logo

Cluster: HRGMv2_0175_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0175_2 HRGMv2_0175_2_469 542446 543903 - GT2
TC HRGMv2_0175_2 HRGMv2_0175_2_470 543914 545392 - 2.A.21.3.7
CAZyme HRGMv2_0175_2 HRGMv2_0175_2_471 545405 546568 - GH171
pfam HRGMv2_0175_2 HRGMv2_0175_2_472 547023 548981 + Metallophos | PQQ | PQQ | PQQ | PQQ_2 | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4
TC HRGMv2_0175_2 HRGMv2_0175_2_473 549133 552501 + 1.B.14.6.1
pfam HRGMv2_0175_2 HRGMv2_0175_2_474 552513 554273 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0175_2 HRGMv2_0175_2_475 554382 556922 + GH9
NULL(UNKNOWN) HRGMv2_0175_2 HRGMv2_0175_2_476 556937 559960 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0175_2 HRGMv2_0175_2_477 560317 561441 + 1.I.1.1.3
Gene ID: HRGMv2_0175_2_469
Type: CAZyme
Location: 542446 - 543903 (-)
Gene ID: HRGMv2_0175_2_470
Type: TC
Location: 543914 - 545392 (-)
Gene ID: HRGMv2_0175_2_471
Type: CAZyme
Location: 545405 - 546568 (-)
Gene ID: HRGMv2_0175_2_472
Type: pfam
Location: 547023 - 548981 (+)
Gene ID: HRGMv2_0175_2_473
Type: TC
Location: 549133 - 552501 (+)
Gene ID: HRGMv2_0175_2_474
Type: pfam
Location: 552513 - 554273 (+)
Gene ID: HRGMv2_0175_2_475
Type: CAZyme
Location: 554382 - 556922 (+)
Gene ID: HRGMv2_0175_2_476
Type:
Location: 556937 - 559960 (+)
Gene ID: HRGMv2_0175_2_477
Type: TC
Location: 560317 - 561441 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List