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Cluster: HRGMv2_0175_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0175_2 HRGMv2_0175_2_301 350213 351592 - 2.A.6.2.18
TC HRGMv2_0175_2 HRGMv2_0175_2_302 351585 354737 - 2.A.6.2.22
TC HRGMv2_0175_2 HRGMv2_0175_2_303 354734 355906 - 2.A.6.2.42
NULL(UNKNOWN) HRGMv2_0175_2 HRGMv2_0175_2_304 356290 356421 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0175_2 HRGMv2_0175_2_305 356512 359523 + 1.B.14.6.1
TC HRGMv2_0175_2 HRGMv2_0175_2_306 359543 361168 + 8.A.46.1.1
pfam HRGMv2_0175_2 HRGMv2_0175_2_307 361202 362269 + SusE | SusF_SusE
CAZyme HRGMv2_0175_2 HRGMv2_0175_2_308 362443 364659 + GH97
pfam HRGMv2_0175_2 HRGMv2_0175_2_309 364764 366053 - SDH_alpha
pfam HRGMv2_0175_2 HRGMv2_0175_2_310 366525 367472 + DAGK_cat | YegS_C
TC HRGMv2_0175_2 HRGMv2_0175_2_311 367475 370033 - 1.B.14.6.14
TC HRGMv2_0175_2 HRGMv2_0175_2_312 370164 371852 - 3.A.1.120.6
pfam HRGMv2_0175_2 HRGMv2_0175_2_313 371858 372415 - DUF1697
TC HRGMv2_0175_2 HRGMv2_0175_2_314 372429 374084 - 4.C.1.1.4
Gene ID: HRGMv2_0175_2_301
Type: TC
Location: 350213 - 351592 (-)
Gene ID: HRGMv2_0175_2_302
Type: TC
Location: 351585 - 354737 (-)
Gene ID: HRGMv2_0175_2_303
Type: TC
Location: 354734 - 355906 (-)
Gene ID: HRGMv2_0175_2_304
Type:
Location: 356290 - 356421 (+)
Gene ID: HRGMv2_0175_2_305
Type: TC
Location: 356512 - 359523 (+)
Gene ID: HRGMv2_0175_2_306
Type: TC
Location: 359543 - 361168 (+)
Gene ID: HRGMv2_0175_2_307
Type: pfam
Location: 361202 - 362269 (+)
Gene ID: HRGMv2_0175_2_308
Type: CAZyme
Location: 362443 - 364659 (+)
Gene ID: HRGMv2_0175_2_309
Type: pfam
Location: 364764 - 366053 (-)
Gene ID: HRGMv2_0175_2_310
Type: pfam
Location: 366525 - 367472 (+)
Gene ID: HRGMv2_0175_2_311
Type: TC
Location: 367475 - 370033 (-)
Gene ID: HRGMv2_0175_2_312
Type: TC
Location: 370164 - 371852 (-)
Gene ID: HRGMv2_0175_2_313
Type: pfam
Location: 371858 - 372415 (-)
Gene ID: HRGMv2_0175_2_314
Type: TC
Location: 372429 - 374084 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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