Cluster: HRGMv2_0175_CGC16
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 8
- Substrate: beta-glucan
- Genome ID: HRGMv2_0175
- CGC Family ID: CGCFAM_00101
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0175_2 | HRGMv2_0175_2_225 | 242216 | 243808 | - | CBM91 | GH43_12 |
| CAZyme | HRGMv2_0175_2 | HRGMv2_0175_2_226 | 243932 | 246133 | - | GH3 |
| CAZyme | HRGMv2_0175_2 | HRGMv2_0175_2_227 | 246156 | 248522 | - | GH95 |
| CAZyme | HRGMv2_0175_2 | HRGMv2_0175_2_228 | 248526 | 250880 | - | GH31_3 |
| CAZyme | HRGMv2_0175_2 | HRGMv2_0175_2_229 | 250895 | 253078 | - | GH3 |
| TF | HRGMv2_0175_2 | HRGMv2_0175_2_230 | 253174 | 257295 | - | HTH_AraC |
| CAZyme | HRGMv2_0175_2 | HRGMv2_0175_2_231 | 257495 | 260329 | + | GH31_4 |
| TC | HRGMv2_0175_2 | HRGMv2_0175_2_232 | 260406 | 263573 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0175_2 | HRGMv2_0175_2_233 | 263595 | 265211 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | HRGMv2_0175_2 | HRGMv2_0175_2_234 | 265198 | 267105 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0175_2 | HRGMv2_0175_2_235 | 267215 | 268915 | + | GH5_4 |
| CAZyme | HRGMv2_0175_2 | HRGMv2_0175_2_236 | 269039 | 271537 | + | GH2 |
Gene ID: HRGMv2_0175_2_225
Type: CAZyme
Location: 242216 - 243808 (-)
Type: CAZyme
Location: 242216 - 243808 (-)
Gene ID: HRGMv2_0175_2_226
Type: CAZyme
Location: 243932 - 246133 (-)
Type: CAZyme
Location: 243932 - 246133 (-)
Gene ID: HRGMv2_0175_2_227
Type: CAZyme
Location: 246156 - 248522 (-)
Type: CAZyme
Location: 246156 - 248522 (-)
Gene ID: HRGMv2_0175_2_228
Type: CAZyme
Location: 248526 - 250880 (-)
Type: CAZyme
Location: 248526 - 250880 (-)
Gene ID: HRGMv2_0175_2_229
Type: CAZyme
Location: 250895 - 253078 (-)
Type: CAZyme
Location: 250895 - 253078 (-)
Gene ID: HRGMv2_0175_2_230
Type: TF
Location: 253174 - 257295 (-)
Type: TF
Location: 253174 - 257295 (-)
Gene ID: HRGMv2_0175_2_231
Type: CAZyme
Location: 257495 - 260329 (+)
Type: CAZyme
Location: 257495 - 260329 (+)
Gene ID: HRGMv2_0175_2_232
Type: TC
Location: 260406 - 263573 (+)
Type: TC
Location: 260406 - 263573 (+)
Gene ID: HRGMv2_0175_2_233
Type: pfam
Location: 263595 - 265211 (+)
Type: pfam
Location: 263595 - 265211 (+)
Gene ID: HRGMv2_0175_2_234
Type:
Location: 265198 - 267105 (+)
Type:
Location: 265198 - 267105 (+)
Gene ID: HRGMv2_0175_2_235
Type: CAZyme
Location: 267215 - 268915 (+)
Type: CAZyme
Location: 267215 - 268915 (+)
Gene ID: HRGMv2_0175_2_236
Type: CAZyme
Location: 269039 - 271537 (+)
Type: CAZyme
Location: 269039 - 271537 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Species
Dysgonomonas sp900079735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.