Cluster: HRGMv2_0175_CGC15
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0175
- CGC Family ID: CGCFAM_08349
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0175_2 | HRGMv2_0175_2_188 | 196987 | 199149 | + | 9.A.25.1.1 |
| pfam | HRGMv2_0175_2 | HRGMv2_0175_2_189 | 199177 | 200055 | + | GldL_N |
| TC | HRGMv2_0175_2 | HRGMv2_0175_2_190 | 200109 | 201677 | + | 9.A.25.1.1 |
| pfam | HRGMv2_0175_2 | HRGMv2_0175_2_191 | 201699 | 202571 | + | GldN |
| CAZyme | HRGMv2_0175_2 | HRGMv2_0175_2_192 | 202817 | 204187 | - | GH13 |
| TC | HRGMv2_0175_2 | HRGMv2_0175_2_193 | 204223 | 205560 | - | 2.A.2.6.3 |
| TF | HRGMv2_0175_2 | HRGMv2_0175_2_194 | 205595 | 206620 | - | LacI |
| CAZyme | HRGMv2_0175_2 | HRGMv2_0175_2_195 | 206657 | 208501 | - | GH13_46 |
| CAZyme | HRGMv2_0175_2 | HRGMv2_0175_2_196 | 208526 | 211192 | - | CBM20 | GH77 |
| pfam | HRGMv2_0175_2 | HRGMv2_0175_2_197 | 211428 | 212972 | - | Fer4_5 | Fer4_5 | Fer4_7 | Fer4_8 |
| pfam | HRGMv2_0175_2 | HRGMv2_0175_2_198 | 212994 | 213932 | - | DUF362 |
| TC | HRGMv2_0175_2 | HRGMv2_0175_2_199 | 213962 | 215863 | - | 1.B.14.10.1 |
Gene ID: HRGMv2_0175_2_188
Type: TC
Location: 196987 - 199149 (+)
Type: TC
Location: 196987 - 199149 (+)
Gene ID: HRGMv2_0175_2_189
Type: pfam
Location: 199177 - 200055 (+)
Type: pfam
Location: 199177 - 200055 (+)
Gene ID: HRGMv2_0175_2_190
Type: TC
Location: 200109 - 201677 (+)
Type: TC
Location: 200109 - 201677 (+)
Gene ID: HRGMv2_0175_2_191
Type: pfam
Location: 201699 - 202571 (+)
Type: pfam
Location: 201699 - 202571 (+)
Gene ID: HRGMv2_0175_2_192
Type: CAZyme
Location: 202817 - 204187 (-)
Type: CAZyme
Location: 202817 - 204187 (-)
Gene ID: HRGMv2_0175_2_193
Type: TC
Location: 204223 - 205560 (-)
Type: TC
Location: 204223 - 205560 (-)
Gene ID: HRGMv2_0175_2_194
Type: TF
Location: 205595 - 206620 (-)
Type: TF
Location: 205595 - 206620 (-)
Gene ID: HRGMv2_0175_2_195
Type: CAZyme
Location: 206657 - 208501 (-)
Type: CAZyme
Location: 206657 - 208501 (-)
Gene ID: HRGMv2_0175_2_196
Type: CAZyme
Location: 208526 - 211192 (-)
Type: CAZyme
Location: 208526 - 211192 (-)
Gene ID: HRGMv2_0175_2_197
Type: pfam
Location: 211428 - 212972 (-)
Type: pfam
Location: 211428 - 212972 (-)
Gene ID: HRGMv2_0175_2_198
Type: pfam
Location: 212994 - 213932 (-)
Type: pfam
Location: 212994 - 213932 (-)
Gene ID: HRGMv2_0175_2_199
Type: TC
Location: 213962 - 215863 (-)
Type: TC
Location: 213962 - 215863 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Species
Dysgonomonas sp900079735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.