dbCAN Logo

Cluster: HRGMv2_0175_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0175_1 HRGMv2_0175_1_16 15991 18984 + 1.B.14.6.1
sulfatase HRGMv2_0175_1 HRGMv2_0175_1_17 19003 20568 + S1_27
CAZyme HRGMv2_0175_1 HRGMv2_0175_1_18 20666 21616 + GH43_31
CAZyme HRGMv2_0175_1 HRGMv2_0175_1_19 21778 23433 + GH93
CAZyme HRGMv2_0175_1 HRGMv2_0175_1_20 23713 25728 + GH182
CAZyme HRGMv2_0175_1 HRGMv2_0175_1_21 25979 26992 + GH43_3
CAZyme HRGMv2_0175_1 HRGMv2_0175_1_22 27210 29018 + GH2
Gene ID: HRGMv2_0175_1_16
Type: TC
Location: 15991 - 18984 (+)
Gene ID: HRGMv2_0175_1_17
Type: sulfatase
Location: 19003 - 20568 (+)
Gene ID: HRGMv2_0175_1_18
Type: CAZyme
Location: 20666 - 21616 (+)
Gene ID: HRGMv2_0175_1_19
Type: CAZyme
Location: 21778 - 23433 (+)
Gene ID: HRGMv2_0175_1_20
Type: CAZyme
Location: 23713 - 25728 (+)
Gene ID: HRGMv2_0175_1_21
Type: CAZyme
Location: 25979 - 26992 (+)
Gene ID: HRGMv2_0175_1_22
Type: CAZyme
Location: 27210 - 29018 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List