Cluster: HRGMv2_0156_CGC81
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_0156
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_3373 | 4398637 | 4400931 | - | GH3 |
| NULL(UNKNOWN) | HRGMv2_0156_1 | HRGMv2_0156_1_3374 | 4401044 | 4402306 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_3375 | 4402327 | 4404003 | - | 8.A.46.2.1 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_3376 | 4404015 | 4407203 | - | 1.B.14.6.2 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_3377 | 4407224 | 4408039 | - | GH16_3 |
| TF | HRGMv2_0156_1 | HRGMv2_0156_1_3378 | 4408658 | 4412629 | - | HTH_AraC |
| NULL(UNKNOWN) | HRGMv2_0156_1 | HRGMv2_0156_1_3379 | 4412726 | 4415581 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_3380 | 4415830 | 4418859 | + | 1.B.14.6.1 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_3381 | 4418904 | 4420370 | + | 8.A.46.1.6 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_3382 | 4420394 | 4422502 | + | CBM32 | GH43_28 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_3383 | 4422531 | 4423895 | + | GH144 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_3384 | 4423933 | 4426218 | + | GH3 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_3385 | 4426446 | 4428848 | - | GH3 |
Gene ID: HRGMv2_0156_1_3373
Type: CAZyme
Location: 4398637 - 4400931 (-)
Type: CAZyme
Location: 4398637 - 4400931 (-)
Gene ID: HRGMv2_0156_1_3374
Type:
Location: 4401044 - 4402306 (-)
Type:
Location: 4401044 - 4402306 (-)
Gene ID: HRGMv2_0156_1_3375
Type: TC
Location: 4402327 - 4404003 (-)
Type: TC
Location: 4402327 - 4404003 (-)
Gene ID: HRGMv2_0156_1_3376
Type: TC
Location: 4404015 - 4407203 (-)
Type: TC
Location: 4404015 - 4407203 (-)
Gene ID: HRGMv2_0156_1_3377
Type: CAZyme
Location: 4407224 - 4408039 (-)
Type: CAZyme
Location: 4407224 - 4408039 (-)
Gene ID: HRGMv2_0156_1_3378
Type: TF
Location: 4408658 - 4412629 (-)
Type: TF
Location: 4408658 - 4412629 (-)
Gene ID: HRGMv2_0156_1_3379
Type:
Location: 4412726 - 4415581 (-)
Type:
Location: 4412726 - 4415581 (-)
Gene ID: HRGMv2_0156_1_3380
Type: TC
Location: 4415830 - 4418859 (+)
Type: TC
Location: 4415830 - 4418859 (+)
Gene ID: HRGMv2_0156_1_3381
Type: TC
Location: 4418904 - 4420370 (+)
Type: TC
Location: 4418904 - 4420370 (+)
Gene ID: HRGMv2_0156_1_3382
Type: CAZyme
Location: 4420394 - 4422502 (+)
Type: CAZyme
Location: 4420394 - 4422502 (+)
Gene ID: HRGMv2_0156_1_3383
Type: CAZyme
Location: 4422531 - 4423895 (+)
Type: CAZyme
Location: 4422531 - 4423895 (+)
Gene ID: HRGMv2_0156_1_3384
Type: CAZyme
Location: 4423933 - 4426218 (+)
Type: CAZyme
Location: 4423933 - 4426218 (+)
Gene ID: HRGMv2_0156_1_3385
Type: CAZyme
Location: 4426446 - 4428848 (-)
Type: CAZyme
Location: 4426446 - 4428848 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.