Cluster: HRGMv2_0156_CGC8
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0156
- CGC Family ID: CGCFAM_00986
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_384 | 449966 | 451132 | + | CE9 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_385 | 451154 | 452329 | + | CE9 |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_386 | 452571 | 452933 | - | Thioredoxin | Thioredoxin_2 | TraF |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_387 | 453170 | 454435 | + | 2.A.6.1.5 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_388 | 454458 | 455552 | + | 2.A.6.1.5 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_389 | 455567 | 458692 | + | 2.A.6.1.17 |
| STP | HRGMv2_0156_1 | HRGMv2_0156_1_390 | 458780 | 460111 | - | HATPase_c | HisKA |
| TF | HRGMv2_0156_1 | HRGMv2_0156_1_391 | 460131 | 460805 | - | Trans_reg_C |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_392 | 460924 | 462933 | + | GH97 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_393 | 463174 | 464838 | - | 4.C.1.1.4 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_394 | 465120 | 466586 | - | 2.A.36.6.11 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_395 | 466678 | 467937 | + | 2.A.40.1.4 |
Gene ID: HRGMv2_0156_1_384
Type: CAZyme
Location: 449966 - 451132 (+)
Type: CAZyme
Location: 449966 - 451132 (+)
Gene ID: HRGMv2_0156_1_385
Type: CAZyme
Location: 451154 - 452329 (+)
Type: CAZyme
Location: 451154 - 452329 (+)
Gene ID: HRGMv2_0156_1_386
Type: pfam
Location: 452571 - 452933 (-)
Type: pfam
Location: 452571 - 452933 (-)
Gene ID: HRGMv2_0156_1_387
Type: TC
Location: 453170 - 454435 (+)
Type: TC
Location: 453170 - 454435 (+)
Gene ID: HRGMv2_0156_1_388
Type: TC
Location: 454458 - 455552 (+)
Type: TC
Location: 454458 - 455552 (+)
Gene ID: HRGMv2_0156_1_389
Type: TC
Location: 455567 - 458692 (+)
Type: TC
Location: 455567 - 458692 (+)
Gene ID: HRGMv2_0156_1_390
Type: STP
Location: 458780 - 460111 (-)
Type: STP
Location: 458780 - 460111 (-)
Gene ID: HRGMv2_0156_1_391
Type: TF
Location: 460131 - 460805 (-)
Type: TF
Location: 460131 - 460805 (-)
Gene ID: HRGMv2_0156_1_392
Type: CAZyme
Location: 460924 - 462933 (+)
Type: CAZyme
Location: 460924 - 462933 (+)
Gene ID: HRGMv2_0156_1_393
Type: TC
Location: 463174 - 464838 (-)
Type: TC
Location: 463174 - 464838 (-)
Gene ID: HRGMv2_0156_1_394
Type: TC
Location: 465120 - 466586 (-)
Type: TC
Location: 465120 - 466586 (-)
Gene ID: HRGMv2_0156_1_395
Type: TC
Location: 466678 - 467937 (+)
Type: TC
Location: 466678 - 467937 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.