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Cluster: HRGMv2_0156_CGC76

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_3271 4214459 4216714 - GH92
TC HRGMv2_0156_1 HRGMv2_0156_1_3272 4217152 4220211 + 1.B.14.6.13
pfam HRGMv2_0156_1 HRGMv2_0156_1_3273 4220231 4221841 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) HRGMv2_0156_1 HRGMv2_0156_1_3274 4221844 4223610 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_3275 4223618 4225252 + GH78
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_3276 4225928 4229170 - GH2
NULL(UNKNOWN) HRGMv2_0156_1 HRGMv2_0156_1_3277 4229212 4232844 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_3278 4232871 4234682 - GH105
NULL(UNKNOWN) HRGMv2_0156_1 HRGMv2_0156_1_3279 4234884 4236287 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_3280 4236498 4238450 + CBM51 | GH27
pfam HRGMv2_0156_1 HRGMv2_0156_1_3281 4238892 4239419 - SpoU_methylase
peptidase HRGMv2_0156_1 HRGMv2_0156_1_3282 4239920 4240858 + U32.UPW
TC HRGMv2_0156_1 HRGMv2_0156_1_3283 4241003 4241845 - 1.A.30.1.3
sulfatase HRGMv2_0156_1 HRGMv2_0156_1_3284 4241877 4242461 - S1_7
TC HRGMv2_0156_1 HRGMv2_0156_1_3285 4242509 4243426 - 2.A.115.1.5
pfam HRGMv2_0156_1 HRGMv2_0156_1_3286 4243542 4246376 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1_2
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_3287 4247112 4249682 + GH78
Gene ID: HRGMv2_0156_1_3271
Type: CAZyme
Location: 4214459 - 4216714 (-)
Gene ID: HRGMv2_0156_1_3272
Type: TC
Location: 4217152 - 4220211 (+)
Gene ID: HRGMv2_0156_1_3273
Type: pfam
Location: 4220231 - 4221841 (+)
Gene ID: HRGMv2_0156_1_3274
Type:
Location: 4221844 - 4223610 (+)
Gene ID: HRGMv2_0156_1_3275
Type: CAZyme
Location: 4223618 - 4225252 (+)
Gene ID: HRGMv2_0156_1_3276
Type: CAZyme
Location: 4225928 - 4229170 (-)
Gene ID: HRGMv2_0156_1_3277
Type:
Location: 4229212 - 4232844 (-)
Gene ID: HRGMv2_0156_1_3278
Type: CAZyme
Location: 4232871 - 4234682 (-)
Gene ID: HRGMv2_0156_1_3279
Type:
Location: 4234884 - 4236287 (-)
Gene ID: HRGMv2_0156_1_3280
Type: CAZyme
Location: 4236498 - 4238450 (+)
Gene ID: HRGMv2_0156_1_3281
Type: pfam
Location: 4238892 - 4239419 (-)
Gene ID: HRGMv2_0156_1_3282
Type: peptidase
Location: 4239920 - 4240858 (+)
Gene ID: HRGMv2_0156_1_3283
Type: TC
Location: 4241003 - 4241845 (-)
Gene ID: HRGMv2_0156_1_3284
Type: sulfatase
Location: 4241877 - 4242461 (-)
Gene ID: HRGMv2_0156_1_3285
Type: TC
Location: 4242509 - 4243426 (-)
Gene ID: HRGMv2_0156_1_3286
Type: pfam
Location: 4243542 - 4246376 (-)
Gene ID: HRGMv2_0156_1_3287
Type: CAZyme
Location: 4247112 - 4249682 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0156_1_3271 vegan > omnivore 1.52438 0.00026
HRGMv2_0156_1_3271 vegetarian > omnivore 1.08195 0.00153
HRGMv2_0156_1_3272 vegan > omnivore 2.54544 0.00026
HRGMv2_0156_1_3272 vegetarian > omnivore 2.00496 0.00153
HRGMv2_0156_1_3273 vegetarian > omnivore 2.20699 0.00153
HRGMv2_0156_1_3273 vegan > omnivore 2.75491 0.00026
HRGMv2_0156_1_3275 vegetarian > omnivore 1.89953 0.00153
HRGMv2_0156_1_3275 vegan > omnivore 2.41687 0.00026
HRGMv2_0156_1_3276 vegetarian > omnivore 1.44984 0.00153
HRGMv2_0156_1_3276 vegan > omnivore 1.90886 0.00026
HRGMv2_0156_1_3277 vegetarian > omnivore 2.12141 0.00153
HRGMv2_0156_1_3277 vegan > omnivore 2.72334 0.00026
HRGMv2_0156_1_3278 vegetarian > omnivore 1.90574 0.00153
HRGMv2_0156_1_3278 vegan > omnivore 2.33867 0.00026
HRGMv2_0156_1_3279 vegetarian > omnivore 1.67897 0.00153
HRGMv2_0156_1_3279 vegan > omnivore 2.31545 0.00026
HRGMv2_0156_1_3280 vegetarian > omnivore 1.07494 0.00153
HRGMv2_0156_1_3280 vegan > omnivore 2.06972 0.00026

🧭 Explore Read Mapping of CGC

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