Cluster: HRGMv2_0156_CGC65
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_0156
- CGC Family ID: CGCFAM_01917
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2847 | 3619425 | 3621479 | - | GH127 |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_2848 | 3621517 | 3622938 | - | Asp_protease_2 |
| sulfatase | HRGMv2_0156_1 | HRGMv2_0156_1_2849 | 3623042 | 3624172 | - | S1_22 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2850 | 3624316 | 3625779 | - | GH125 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2851 | 3625782 | 3628073 | - | GH92 |
| sulfatase | HRGMv2_0156_1 | HRGMv2_0156_1_2852 | 3628086 | 3630563 | - | S1_4 |
| NULL(UNKNOWN) | HRGMv2_0156_1 | HRGMv2_0156_1_2853 | 3630594 | 3632765 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2854 | 3632794 | 3634053 | - | GH76 |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_2855 | 3634286 | 3635752 | - | DUF4972 |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_2856 | 3635775 | 3636917 | - | Laminin_G_3 | DUF4972 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2857 | 3636943 | 3638262 | - | GH76 |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_2858 | 3638289 | 3640208 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_2859 | 3640220 | 3643651 | - | 1.B.14.6.1 |
| STP | HRGMv2_0156_1 | HRGMv2_0156_1_2860 | 3643811 | 3645013 | - | FecR |
| STP | HRGMv2_0156_1 | HRGMv2_0156_1_2861 | 3645128 | 3645700 | - | Sigma70_r4_2 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2862 | 3645806 | 3646795 | - | GH43_34 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2863 | 3646961 | 3648070 | + | GH43_26 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2864 | 3648318 | 3650138 | + | GH2 |
Gene ID: HRGMv2_0156_1_2847
Type: CAZyme
Location: 3619425 - 3621479 (-)
Type: CAZyme
Location: 3619425 - 3621479 (-)
Gene ID: HRGMv2_0156_1_2848
Type: pfam
Location: 3621517 - 3622938 (-)
Type: pfam
Location: 3621517 - 3622938 (-)
Gene ID: HRGMv2_0156_1_2849
Type: sulfatase
Location: 3623042 - 3624172 (-)
Type: sulfatase
Location: 3623042 - 3624172 (-)
Gene ID: HRGMv2_0156_1_2850
Type: CAZyme
Location: 3624316 - 3625779 (-)
Type: CAZyme
Location: 3624316 - 3625779 (-)
Gene ID: HRGMv2_0156_1_2851
Type: CAZyme
Location: 3625782 - 3628073 (-)
Type: CAZyme
Location: 3625782 - 3628073 (-)
Gene ID: HRGMv2_0156_1_2852
Type: sulfatase
Location: 3628086 - 3630563 (-)
Type: sulfatase
Location: 3628086 - 3630563 (-)
Gene ID: HRGMv2_0156_1_2853
Type:
Location: 3630594 - 3632765 (-)
Type:
Location: 3630594 - 3632765 (-)
Gene ID: HRGMv2_0156_1_2854
Type: CAZyme
Location: 3632794 - 3634053 (-)
Type: CAZyme
Location: 3632794 - 3634053 (-)
Gene ID: HRGMv2_0156_1_2855
Type: pfam
Location: 3634286 - 3635752 (-)
Type: pfam
Location: 3634286 - 3635752 (-)
Gene ID: HRGMv2_0156_1_2856
Type: pfam
Location: 3635775 - 3636917 (-)
Type: pfam
Location: 3635775 - 3636917 (-)
Gene ID: HRGMv2_0156_1_2857
Type: CAZyme
Location: 3636943 - 3638262 (-)
Type: CAZyme
Location: 3636943 - 3638262 (-)
Gene ID: HRGMv2_0156_1_2858
Type: pfam
Location: 3638289 - 3640208 (-)
Type: pfam
Location: 3638289 - 3640208 (-)
Gene ID: HRGMv2_0156_1_2859
Type: TC
Location: 3640220 - 3643651 (-)
Type: TC
Location: 3640220 - 3643651 (-)
Gene ID: HRGMv2_0156_1_2860
Type: STP
Location: 3643811 - 3645013 (-)
Type: STP
Location: 3643811 - 3645013 (-)
Gene ID: HRGMv2_0156_1_2861
Type: STP
Location: 3645128 - 3645700 (-)
Type: STP
Location: 3645128 - 3645700 (-)
Gene ID: HRGMv2_0156_1_2862
Type: CAZyme
Location: 3645806 - 3646795 (-)
Type: CAZyme
Location: 3645806 - 3646795 (-)
Gene ID: HRGMv2_0156_1_2863
Type: CAZyme
Location: 3646961 - 3648070 (+)
Type: CAZyme
Location: 3646961 - 3648070 (+)
Gene ID: HRGMv2_0156_1_2864
Type: CAZyme
Location: 3648318 - 3650138 (+)
Type: CAZyme
Location: 3648318 - 3650138 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0156_1_2848 | vegan > omnivore | 1.37155 | 0.00026 |