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Cluster: HRGMv2_0156_CGC62

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2778 3517829 3519052 + CE15
NULL(UNKNOWN) HRGMv2_0156_1 HRGMv2_0156_1_2779 3519083 3520729 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0156_1 HRGMv2_0156_1_2780 3520854 3523925 + 1.B.14.6.1
TC HRGMv2_0156_1 HRGMv2_0156_1_2781 3523939 3525435 + 8.A.46.1.3
NULL(UNKNOWN) HRGMv2_0156_1 HRGMv2_0156_1_2782 3525463 3527976 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2783 3528043 3529671 + GH20
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2784 3529689 3531338 + GH32
TC HRGMv2_0156_1 HRGMv2_0156_1_2785 3531450 3532766 + 2.A.1.7.9
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2786 3532799 3533986 + CE9
Gene ID: HRGMv2_0156_1_2778
Type: CAZyme
Location: 3517829 - 3519052 (+)
Gene ID: HRGMv2_0156_1_2779
Type:
Location: 3519083 - 3520729 (+)
Gene ID: HRGMv2_0156_1_2780
Type: TC
Location: 3520854 - 3523925 (+)
Gene ID: HRGMv2_0156_1_2781
Type: TC
Location: 3523939 - 3525435 (+)
Gene ID: HRGMv2_0156_1_2782
Type:
Location: 3525463 - 3527976 (+)
Gene ID: HRGMv2_0156_1_2783
Type: CAZyme
Location: 3528043 - 3529671 (+)
Gene ID: HRGMv2_0156_1_2784
Type: CAZyme
Location: 3529689 - 3531338 (+)
Gene ID: HRGMv2_0156_1_2785
Type: TC
Location: 3531450 - 3532766 (+)
Gene ID: HRGMv2_0156_1_2786
Type: CAZyme
Location: 3532799 - 3533986 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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