Cluster: HRGMv2_0156_CGC61
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_0156
- CGC Family ID: CGCFAM_04404
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_2760 | 3488856 | 3492005 | - | 1.B.14.6.1 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2761 | 3492126 | 3493859 | - | CBM91 | GH43_12 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2762 | 3494077 | 3495408 | - | CBM6 | GH43_29 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2763 | 3495428 | 3497404 | - | GH97 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2764 | 3497425 | 3499869 | - | GH31_4 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2765 | 3499895 | 3501622 | - | CBM91 | GH43_12 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2766 | 3502055 | 3504640 | - | GH3 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2767 | 3504737 | 3506335 | - | CBM91 | GH43_10 |
| sulfatase | HRGMv2_0156_1 | HRGMv2_0156_1_2768 | 3506631 | 3507647 | - | S1_16 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_2769 | 3507672 | 3508964 | - | 2.A.1.7.1 |
Gene ID: HRGMv2_0156_1_2760
Type: TC
Location: 3488856 - 3492005 (-)
Type: TC
Location: 3488856 - 3492005 (-)
Gene ID: HRGMv2_0156_1_2761
Type: CAZyme
Location: 3492126 - 3493859 (-)
Type: CAZyme
Location: 3492126 - 3493859 (-)
Gene ID: HRGMv2_0156_1_2762
Type: CAZyme
Location: 3494077 - 3495408 (-)
Type: CAZyme
Location: 3494077 - 3495408 (-)
Gene ID: HRGMv2_0156_1_2763
Type: CAZyme
Location: 3495428 - 3497404 (-)
Type: CAZyme
Location: 3495428 - 3497404 (-)
Gene ID: HRGMv2_0156_1_2764
Type: CAZyme
Location: 3497425 - 3499869 (-)
Type: CAZyme
Location: 3497425 - 3499869 (-)
Gene ID: HRGMv2_0156_1_2765
Type: CAZyme
Location: 3499895 - 3501622 (-)
Type: CAZyme
Location: 3499895 - 3501622 (-)
Gene ID: HRGMv2_0156_1_2766
Type: CAZyme
Location: 3502055 - 3504640 (-)
Type: CAZyme
Location: 3502055 - 3504640 (-)
Gene ID: HRGMv2_0156_1_2767
Type: CAZyme
Location: 3504737 - 3506335 (-)
Type: CAZyme
Location: 3504737 - 3506335 (-)
Gene ID: HRGMv2_0156_1_2768
Type: sulfatase
Location: 3506631 - 3507647 (-)
Type: sulfatase
Location: 3506631 - 3507647 (-)
Gene ID: HRGMv2_0156_1_2769
Type: TC
Location: 3507672 - 3508964 (-)
Type: TC
Location: 3507672 - 3508964 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0156_1_2760 | vegan > omnivore | 1.70640 | 0.00026 |