Cluster: HRGMv2_0156_CGC49
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0156
- CGC Family ID: CGCFAM_00363
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2328 | 2863508 | 2864803 | + | GH23 |
| STP | HRGMv2_0156_1 | HRGMv2_0156_1_2329 | 2864876 | 2867116 | + | HD |
| TF | HRGMv2_0156_1 | HRGMv2_0156_1_2330 | 2867271 | 2867615 | - | MerR |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_2331 | 2867636 | 2868604 | - | 1.A.34.1.3 |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_2332 | 2868776 | 2871394 | + | tRNA-synt_2c | DHHA1 | tRNA_SAD |
| NULL(UNKNOWN) | HRGMv2_0156_1 | HRGMv2_0156_1_2333 | 2871590 | 2871778 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2334 | 2871896 | 2874133 | + | GH92 |
| TF | HRGMv2_0156_1 | HRGMv2_0156_1_2335 | 2874163 | 2874720 | + | GerE |
| STP | HRGMv2_0156_1 | HRGMv2_0156_1_2336 | 2874737 | 2875762 | + | FecR |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2337 | 2875807 | 2878113 | + | GH92 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2338 | 2878220 | 2880490 | + | GH92 |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_2339 | 2880666 | 2881100 | + | DUF6078 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_2340 | 2881546 | 2884899 | + | 1.B.14.6.13 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_2341 | 2884908 | 2886488 | + | 8.A.46.2.2 |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_2342 | 2886501 | 2887535 | + | GH18_BT1044-like |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_2343 | 2887542 | 2888714 | + | BT_3987-like_N | Laminin_G_3 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_2344 | 2888743 | 2890779 | + | GH18 |
Gene ID: HRGMv2_0156_1_2328
Type: CAZyme
Location: 2863508 - 2864803 (+)
Type: CAZyme
Location: 2863508 - 2864803 (+)
Gene ID: HRGMv2_0156_1_2329
Type: STP
Location: 2864876 - 2867116 (+)
Type: STP
Location: 2864876 - 2867116 (+)
Gene ID: HRGMv2_0156_1_2330
Type: TF
Location: 2867271 - 2867615 (-)
Type: TF
Location: 2867271 - 2867615 (-)
Gene ID: HRGMv2_0156_1_2331
Type: TC
Location: 2867636 - 2868604 (-)
Type: TC
Location: 2867636 - 2868604 (-)
Gene ID: HRGMv2_0156_1_2332
Type: pfam
Location: 2868776 - 2871394 (+)
Type: pfam
Location: 2868776 - 2871394 (+)
Gene ID: HRGMv2_0156_1_2333
Type:
Location: 2871590 - 2871778 (+)
Type:
Location: 2871590 - 2871778 (+)
Gene ID: HRGMv2_0156_1_2334
Type: CAZyme
Location: 2871896 - 2874133 (+)
Type: CAZyme
Location: 2871896 - 2874133 (+)
Gene ID: HRGMv2_0156_1_2335
Type: TF
Location: 2874163 - 2874720 (+)
Type: TF
Location: 2874163 - 2874720 (+)
Gene ID: HRGMv2_0156_1_2336
Type: STP
Location: 2874737 - 2875762 (+)
Type: STP
Location: 2874737 - 2875762 (+)
Gene ID: HRGMv2_0156_1_2337
Type: CAZyme
Location: 2875807 - 2878113 (+)
Type: CAZyme
Location: 2875807 - 2878113 (+)
Gene ID: HRGMv2_0156_1_2338
Type: CAZyme
Location: 2878220 - 2880490 (+)
Type: CAZyme
Location: 2878220 - 2880490 (+)
Gene ID: HRGMv2_0156_1_2339
Type: pfam
Location: 2880666 - 2881100 (+)
Type: pfam
Location: 2880666 - 2881100 (+)
Gene ID: HRGMv2_0156_1_2340
Type: TC
Location: 2881546 - 2884899 (+)
Type: TC
Location: 2881546 - 2884899 (+)
Gene ID: HRGMv2_0156_1_2341
Type: TC
Location: 2884908 - 2886488 (+)
Type: TC
Location: 2884908 - 2886488 (+)
Gene ID: HRGMv2_0156_1_2342
Type: pfam
Location: 2886501 - 2887535 (+)
Type: pfam
Location: 2886501 - 2887535 (+)
Gene ID: HRGMv2_0156_1_2343
Type: pfam
Location: 2887542 - 2888714 (+)
Type: pfam
Location: 2887542 - 2888714 (+)
Gene ID: HRGMv2_0156_1_2344
Type: CAZyme
Location: 2888743 - 2890779 (+)
Type: CAZyme
Location: 2888743 - 2890779 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.