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Cluster: HRGMv2_0156_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0156_1 HRGMv2_0156_1_2252 2752369 2753820 + 2.A.38.1.1
pfam HRGMv2_0156_1 HRGMv2_0156_1_2253 2754034 2755416 - Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2254 2755466 2756599 - GH130_3
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2255 2756678 2758834 - GH92
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2256 2758864 2761137 - GH92
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2257 2761192 2763180 - CE20 | CE20
pfam HRGMv2_0156_1 HRGMv2_0156_1_2258 2763392 2764717 - DUF5005
TC HRGMv2_0156_1 HRGMv2_0156_1_2259 2764736 2767825 - 1.B.14.6.1
Gene ID: HRGMv2_0156_1_2252
Type: TC
Location: 2752369 - 2753820 (+)
Gene ID: HRGMv2_0156_1_2253
Type: pfam
Location: 2754034 - 2755416 (-)
Gene ID: HRGMv2_0156_1_2254
Type: CAZyme
Location: 2755466 - 2756599 (-)
Gene ID: HRGMv2_0156_1_2255
Type: CAZyme
Location: 2756678 - 2758834 (-)
Gene ID: HRGMv2_0156_1_2256
Type: CAZyme
Location: 2758864 - 2761137 (-)
Gene ID: HRGMv2_0156_1_2257
Type: CAZyme
Location: 2761192 - 2763180 (-)
Gene ID: HRGMv2_0156_1_2258
Type: pfam
Location: 2763392 - 2764717 (-)
Gene ID: HRGMv2_0156_1_2259
Type: TC
Location: 2764736 - 2767825 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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