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Cluster: HRGMv2_0156_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2169 2599991 2601400 - GH105
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2170 2601404 2603245 - PL11_1
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2171 2603538 2604629 + GH105
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2172 2604783 2606417 + CE12 | CE12
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2173 2606736 2610158 - PL26
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2174 2610339 2612423 - PL11_1
TC HRGMv2_0156_1 HRGMv2_0156_1_2175 2612479 2614209 - 8.A.46.1.3
TC HRGMv2_0156_1 HRGMv2_0156_1_2176 2614233 2617274 - 1.B.14.6.2
pfam HRGMv2_0156_1 HRGMv2_0156_1_2177 2617317 2619347 - SusD_RagB | SusD-like_3
TC HRGMv2_0156_1 HRGMv2_0156_1_2178 2619367 2622525 - 1.B.14.6.1
Gene ID: HRGMv2_0156_1_2169
Type: CAZyme
Location: 2599991 - 2601400 (-)
Gene ID: HRGMv2_0156_1_2170
Type: CAZyme
Location: 2601404 - 2603245 (-)
Gene ID: HRGMv2_0156_1_2171
Type: CAZyme
Location: 2603538 - 2604629 (+)
Gene ID: HRGMv2_0156_1_2172
Type: CAZyme
Location: 2604783 - 2606417 (+)
Gene ID: HRGMv2_0156_1_2173
Type: CAZyme
Location: 2606736 - 2610158 (-)
Gene ID: HRGMv2_0156_1_2174
Type: CAZyme
Location: 2610339 - 2612423 (-)
Gene ID: HRGMv2_0156_1_2175
Type: TC
Location: 2612479 - 2614209 (-)
Gene ID: HRGMv2_0156_1_2176
Type: TC
Location: 2614233 - 2617274 (-)
Gene ID: HRGMv2_0156_1_2177
Type: pfam
Location: 2617317 - 2619347 (-)
Gene ID: HRGMv2_0156_1_2178
Type: TC
Location: 2619367 - 2622525 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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