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Cluster: HRGMv2_0156_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0156_1 HRGMv2_0156_1_2095 2503368 2506625 - 1.B.14.6.1
pfam HRGMv2_0156_1 HRGMv2_0156_1_2096 2506646 2508907 - Fasciclin
NULL(UNKNOWN) HRGMv2_0156_1 HRGMv2_0156_1_2097 2509160 2509528 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2098 2509547 2511232 - PL1_2
NULL(UNKNOWN) HRGMv2_0156_1 HRGMv2_0156_1_2099 2511411 2512523 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2100 2512594 2515125 - CE20 | GH105
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2101 2515326 2516636 - GH28
NULL(UNKNOWN) HRGMv2_0156_1 HRGMv2_0156_1_2102 2516931 2517365 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_2103 2517412 2518956 - PL9_1
Gene ID: HRGMv2_0156_1_2095
Type: TC
Location: 2503368 - 2506625 (-)
Gene ID: HRGMv2_0156_1_2096
Type: pfam
Location: 2506646 - 2508907 (-)
Gene ID: HRGMv2_0156_1_2097
Type:
Location: 2509160 - 2509528 (-)
Gene ID: HRGMv2_0156_1_2098
Type: CAZyme
Location: 2509547 - 2511232 (-)
Gene ID: HRGMv2_0156_1_2099
Type:
Location: 2511411 - 2512523 (-)
Gene ID: HRGMv2_0156_1_2100
Type: CAZyme
Location: 2512594 - 2515125 (-)
Gene ID: HRGMv2_0156_1_2101
Type: CAZyme
Location: 2515326 - 2516636 (-)
Gene ID: HRGMv2_0156_1_2102
Type:
Location: 2516931 - 2517365 (-)
Gene ID: HRGMv2_0156_1_2103
Type: CAZyme
Location: 2517412 - 2518956 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0156_1_2102 vegan > omnivore 1.50255 0.00026
HRGMv2_0156_1_2102 vegetarian > omnivore 1.16776 0.00153

🧭 Explore Read Mapping of CGC

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