Cluster: HRGMv2_0156_CGC33
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate: host glycan
- Genome ID: HRGMv2_0156
- CGC Family ID: CGCFAM_00219
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_1667 | 1980369 | 1982639 | + | GH95 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_1668 | 1982881 | 1985100 | + | PL12_2 |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_1669 | 1985119 | 1987317 | + | SGBP_BT4661-like |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_1670 | 1987344 | 1990499 | + | 1.B.14.6.1 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_1671 | 1990514 | 1992187 | + | 8.A.46.1.3 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_1672 | 1992377 | 1993663 | + | GH88 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_1673 | 1993692 | 1995692 | + | PL12_2 |
Gene ID: HRGMv2_0156_1_1667
Type: CAZyme
Location: 1980369 - 1982639 (+)
Type: CAZyme
Location: 1980369 - 1982639 (+)
Gene ID: HRGMv2_0156_1_1668
Type: CAZyme
Location: 1982881 - 1985100 (+)
Type: CAZyme
Location: 1982881 - 1985100 (+)
Gene ID: HRGMv2_0156_1_1669
Type: pfam
Location: 1985119 - 1987317 (+)
Type: pfam
Location: 1985119 - 1987317 (+)
Gene ID: HRGMv2_0156_1_1670
Type: TC
Location: 1987344 - 1990499 (+)
Type: TC
Location: 1987344 - 1990499 (+)
Gene ID: HRGMv2_0156_1_1671
Type: TC
Location: 1990514 - 1992187 (+)
Type: TC
Location: 1990514 - 1992187 (+)
Gene ID: HRGMv2_0156_1_1672
Type: CAZyme
Location: 1992377 - 1993663 (+)
Type: CAZyme
Location: 1992377 - 1993663 (+)
Gene ID: HRGMv2_0156_1_1673
Type: CAZyme
Location: 1993692 - 1995692 (+)
Type: CAZyme
Location: 1993692 - 1995692 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0156_1_1667 | vegan > omnivore | 2.22490 | 0.00026 |
| HRGMv2_0156_1_1667 | vegetarian > omnivore | 1.31091 | 0.00153 |
| HRGMv2_0156_1_1669 | vegan > omnivore | 2.61171 | 0.00026 |
| HRGMv2_0156_1_1669 | vegetarian > omnivore | 2.54508 | 0.00153 |
| HRGMv2_0156_1_1670 | vegan > omnivore | 1.36899 | 0.00026 |
| HRGMv2_0156_1_1670 | vegetarian > omnivore | 1.74737 | 0.00153 |
| HRGMv2_0156_1_1671 | vegan > omnivore | 1.38149 | 0.00026 |