Cluster: HRGMv2_0156_CGC31
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0156
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_1629 | 1924480 | 1925613 | - | GT4 |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_1630 | 1925618 | 1926541 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| NULL(UNKNOWN) | HRGMv2_0156_1 | HRGMv2_0156_1_1631 | 1927025 | 1927432 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_1632 | 1927572 | 1928639 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_0156_1 | HRGMv2_0156_1_1633 | 1928626 | 1929885 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_1634 | 1929892 | 1930866 | - | GT8 |
| CAZyme | HRGMv2_0156_1 | HRGMv2_0156_1_1635 | 1930851 | 1931720 | - | GT11 |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_1636 | 1931720 | 1932970 | - | Amino_oxidase | NAD_binding_8 |
| pfam | HRGMv2_0156_1 | HRGMv2_0156_1_1637 | 1932975 | 1933931 | - | Glycos_transf_2 |
| TC | HRGMv2_0156_1 | HRGMv2_0156_1_1638 | 1933924 | 1935261 | - | 2.A.66.7.1 |
Gene ID: HRGMv2_0156_1_1629
Type: CAZyme
Location: 1924480 - 1925613 (-)
Type: CAZyme
Location: 1924480 - 1925613 (-)
Gene ID: HRGMv2_0156_1_1630
Type: pfam
Location: 1925618 - 1926541 (-)
Type: pfam
Location: 1925618 - 1926541 (-)
Gene ID: HRGMv2_0156_1_1631
Type:
Location: 1927025 - 1927432 (-)
Type:
Location: 1927025 - 1927432 (-)
Gene ID: HRGMv2_0156_1_1632
Type: CAZyme
Location: 1927572 - 1928639 (-)
Type: CAZyme
Location: 1927572 - 1928639 (-)
Gene ID: HRGMv2_0156_1_1633
Type:
Location: 1928626 - 1929885 (-)
Type:
Location: 1928626 - 1929885 (-)
Gene ID: HRGMv2_0156_1_1634
Type: CAZyme
Location: 1929892 - 1930866 (-)
Type: CAZyme
Location: 1929892 - 1930866 (-)
Gene ID: HRGMv2_0156_1_1635
Type: CAZyme
Location: 1930851 - 1931720 (-)
Type: CAZyme
Location: 1930851 - 1931720 (-)
Gene ID: HRGMv2_0156_1_1636
Type: pfam
Location: 1931720 - 1932970 (-)
Type: pfam
Location: 1931720 - 1932970 (-)
Gene ID: HRGMv2_0156_1_1637
Type: pfam
Location: 1932975 - 1933931 (-)
Type: pfam
Location: 1932975 - 1933931 (-)
Gene ID: HRGMv2_0156_1_1638
Type: TC
Location: 1933924 - 1935261 (-)
Type: TC
Location: 1933924 - 1935261 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.