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Cluster: HRGMv2_0156_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_1470 1725115 1725933 - CE1
pfam HRGMv2_0156_1 HRGMv2_0156_1_1471 1725959 1726393 - DUF2007
TC HRGMv2_0156_1 HRGMv2_0156_1_1472 1726575 1728953 + 1.B.14.6.5
peptidase HRGMv2_0156_1 HRGMv2_0156_1_1473 1728987 1729772 + M48.UPC
TC HRGMv2_0156_1 HRGMv2_0156_1_1474 1730024 1731316 + 9.A.40.2.2
pfam HRGMv2_0156_1 HRGMv2_0156_1_1475 1731374 1731850 + NlpE
pfam HRGMv2_0156_1 HRGMv2_0156_1_1476 1731939 1732496 - AhpC-TSA | Redoxin | Thioredoxin_8
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_1477 1732561 1733781 - GH88
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_1478 1733850 1735499 - CBM91 | GH43_10
CAZyme HRGMv2_0156_1 HRGMv2_0156_1_1479 1735706 1737913 - GH36
Gene ID: HRGMv2_0156_1_1470
Type: CAZyme
Location: 1725115 - 1725933 (-)
Gene ID: HRGMv2_0156_1_1471
Type: pfam
Location: 1725959 - 1726393 (-)
Gene ID: HRGMv2_0156_1_1472
Type: TC
Location: 1726575 - 1728953 (+)
Gene ID: HRGMv2_0156_1_1473
Type: peptidase
Location: 1728987 - 1729772 (+)
Gene ID: HRGMv2_0156_1_1474
Type: TC
Location: 1730024 - 1731316 (+)
Gene ID: HRGMv2_0156_1_1475
Type: pfam
Location: 1731374 - 1731850 (+)
Gene ID: HRGMv2_0156_1_1476
Type: pfam
Location: 1731939 - 1732496 (-)
Gene ID: HRGMv2_0156_1_1477
Type: CAZyme
Location: 1732561 - 1733781 (-)
Gene ID: HRGMv2_0156_1_1478
Type: CAZyme
Location: 1733850 - 1735499 (-)
Gene ID: HRGMv2_0156_1_1479
Type: CAZyme
Location: 1735706 - 1737913 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0156_1_1476 vegan > omnivore 2.15247 0.00026
HRGMv2_0156_1_1476 vegetarian > omnivore 2.39753 0.00153
HRGMv2_0156_1_1479 vegan > omnivore 1.90269 0.00026
HRGMv2_0156_1_1479 vegetarian > omnivore 1.72666 0.00153

🧭 Explore Read Mapping of CGC

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